Experiment: KLEB17 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS00475 and BWI76_RS00480 are separated by 128 nucleotides BWI76_RS00480 and BWI76_RS00485 are separated by 144 nucleotides
BWI76_RS00475: BWI76_RS00475 - sulfurtransferase FdhD, at 97,968 to 98,804
_RS00475
BWI76_RS00480: BWI76_RS00480 - hypothetical protein, at 98,933 to 99,145
_RS00480
BWI76_RS00485: BWI76_RS00485 - beta-xylosidase, at 99,290 to 100,801
_RS00485
Position (kb) 98
99
100 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 97.944 kb on - strand at 98.110 kb on - strand, within BWI76_RS00475 at 98.237 kb on - strand, within BWI76_RS00475 at 98.312 kb on + strand, within BWI76_RS00475 at 98.315 kb on - strand, within BWI76_RS00475 at 98.386 kb on + strand, within BWI76_RS00475 at 98.443 kb on + strand, within BWI76_RS00475 at 98.499 kb on - strand, within BWI76_RS00475 at 98.529 kb on - strand, within BWI76_RS00475 at 98.560 kb on - strand, within BWI76_RS00475 at 98.561 kb on - strand, within BWI76_RS00475 at 98.652 kb on + strand, within BWI76_RS00475 at 98.861 kb on - strand at 98.891 kb on - strand at 99.041 kb on - strand, within BWI76_RS00480 at 99.058 kb on + strand, within BWI76_RS00480 at 99.058 kb on + strand, within BWI76_RS00480 at 99.058 kb on + strand, within BWI76_RS00480 at 99.154 kb on - strand at 99.289 kb on - strand at 99.410 kb on + strand at 99.616 kb on + strand, within BWI76_RS00485 at 99.651 kb on + strand, within BWI76_RS00485 at 99.651 kb on + strand, within BWI76_RS00485 at 99.659 kb on - strand, within BWI76_RS00485 at 99.659 kb on - strand, within BWI76_RS00485 at 99.834 kb on + strand, within BWI76_RS00485 at 99.911 kb on + strand, within BWI76_RS00485 at 99.929 kb on - strand, within BWI76_RS00485 at 99.931 kb on + strand, within BWI76_RS00485 at 99.956 kb on + strand, within BWI76_RS00485 at 99.956 kb on + strand, within BWI76_RS00485 at 99.956 kb on + strand, within BWI76_RS00485 at 99.992 kb on + strand, within BWI76_RS00485
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB17 MOI 1 remove 97,944 - +1.6 98,110 - BWI76_RS00475 0.17 +0.9 98,237 - BWI76_RS00475 0.32 -0.1 98,312 + BWI76_RS00475 0.41 +2.5 98,315 - BWI76_RS00475 0.41 -1.3 98,386 + BWI76_RS00475 0.50 -1.1 98,443 + BWI76_RS00475 0.57 +0.2 98,499 - BWI76_RS00475 0.63 -4.7 98,529 - BWI76_RS00475 0.67 +1.6 98,560 - BWI76_RS00475 0.71 +0.7 98,561 - BWI76_RS00475 0.71 +1.2 98,652 + BWI76_RS00475 0.82 +0.6 98,861 - +0.4 98,891 - -4.1 99,041 - BWI76_RS00480 0.51 +0.1 99,058 + BWI76_RS00480 0.59 -3.6 99,058 + BWI76_RS00480 0.59 -1.1 99,058 + BWI76_RS00480 0.59 -1.4 99,154 - -0.2 99,289 - -2.6 99,410 + -0.4 99,616 + BWI76_RS00485 0.22 -2.6 99,651 + BWI76_RS00485 0.24 -1.9 99,651 + BWI76_RS00485 0.24 -2.1 99,659 - BWI76_RS00485 0.24 -3.0 99,659 - BWI76_RS00485 0.24 +1.5 99,834 + BWI76_RS00485 0.36 +0.6 99,911 + BWI76_RS00485 0.41 -0.1 99,929 - BWI76_RS00485 0.42 +0.4 99,931 + BWI76_RS00485 0.42 +0.0 99,956 + BWI76_RS00485 0.44 -2.7 99,956 + BWI76_RS00485 0.44 +2.3 99,956 + BWI76_RS00485 0.44 +0.5 99,992 + BWI76_RS00485 0.46 -0.9
Or see this region's nucleotide sequence