Experiment: KLEB16 MOI 0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS26100 and BWI76_RS26105 overlap by 92 nucleotides BWI76_RS26105 and BWI76_RS26110 overlap by 11 nucleotides BWI76_RS26110 and BWI76_RS26115 overlap by 11 nucleotides BWI76_RS26115 and BWI76_RS26120 overlap by 4 nucleotides BWI76_RS26120 and BWI76_RS26125 are separated by 117 nucleotides
BWI76_RS26100: BWI76_RS26100 - DNA transporter HofQ, at 5,392,117 to 5,393,358
_RS26100
BWI76_RS26105: BWI76_RS26105 - hypothetical protein, at 5,393,267 to 5,393,674
_RS26105
BWI76_RS26110: BWI76_RS26110 - hypothetical protein, at 5,393,664 to 5,394,104
_RS26110
BWI76_RS26115: BWI76_RS26115 - hypothetical protein, at 5,394,094 to 5,394,627
_RS26115
BWI76_RS26120: BWI76_RS26120 - hypothetical protein, at 5,394,624 to 5,395,415
_RS26120
BWI76_RS26125: BWI76_RS26125 - carboxypeptidase/penicillin-binding protein 1A, at 5,395,533 to 5,398,091
_RS26125
Position (kb) 5394
5395 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 5393.099 kb on - strand, within BWI76_RS26100 at 5393.136 kb on - strand, within BWI76_RS26100 at 5393.172 kb on + strand, within BWI76_RS26100 at 5393.196 kb on + strand, within BWI76_RS26100 at 5393.465 kb on - strand, within BWI76_RS26105 at 5393.465 kb on - strand, within BWI76_RS26105 at 5393.515 kb on - strand, within BWI76_RS26105 at 5393.515 kb on - strand, within BWI76_RS26105 at 5393.967 kb on - strand, within BWI76_RS26110 at 5394.013 kb on - strand, within BWI76_RS26110 at 5394.016 kb on + strand, within BWI76_RS26110 at 5394.025 kb on + strand, within BWI76_RS26110 at 5394.175 kb on - strand, within BWI76_RS26115 at 5394.258 kb on + strand, within BWI76_RS26115 at 5394.288 kb on + strand, within BWI76_RS26115 at 5394.440 kb on + strand, within BWI76_RS26115 at 5394.448 kb on - strand, within BWI76_RS26115 at 5394.448 kb on - strand, within BWI76_RS26115 at 5394.448 kb on - strand, within BWI76_RS26115 at 5394.622 kb on + strand at 5394.664 kb on - strand at 5394.887 kb on + strand, within BWI76_RS26120 at 5395.067 kb on + strand, within BWI76_RS26120 at 5395.315 kb on - strand, within BWI76_RS26120 at 5395.322 kb on + strand, within BWI76_RS26120 at 5395.471 kb on + strand at 5395.580 kb on + strand at 5395.580 kb on + strand at 5395.588 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB16 MOI 0.1 remove 5,393,099 - BWI76_RS26100 0.79 -0.7 5,393,136 - BWI76_RS26100 0.82 -0.2 5,393,172 + BWI76_RS26100 0.85 -2.9 5,393,196 + BWI76_RS26100 0.87 +0.7 5,393,465 - BWI76_RS26105 0.49 +0.1 5,393,465 - BWI76_RS26105 0.49 -0.8 5,393,515 - BWI76_RS26105 0.61 +0.5 5,393,515 - BWI76_RS26105 0.61 -0.1 5,393,967 - BWI76_RS26110 0.69 +0.9 5,394,013 - BWI76_RS26110 0.79 -0.2 5,394,016 + BWI76_RS26110 0.80 -1.0 5,394,025 + BWI76_RS26110 0.82 +0.5 5,394,175 - BWI76_RS26115 0.15 +0.6 5,394,258 + BWI76_RS26115 0.31 -0.8 5,394,288 + BWI76_RS26115 0.36 +0.1 5,394,440 + BWI76_RS26115 0.65 +1.6 5,394,448 - BWI76_RS26115 0.66 +1.1 5,394,448 - BWI76_RS26115 0.66 -0.5 5,394,448 - BWI76_RS26115 0.66 +0.5 5,394,622 + -1.1 5,394,664 - -0.4 5,394,887 + BWI76_RS26120 0.33 +0.7 5,395,067 + BWI76_RS26120 0.56 +1.2 5,395,315 - BWI76_RS26120 0.87 -1.9 5,395,322 + BWI76_RS26120 0.88 +0.4 5,395,471 + -1.4 5,395,580 + +0.0 5,395,580 + -0.4 5,395,588 - -0.5
Or see this region's nucleotide sequence