Experiment: KLEB16 MOI 0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS22815 and BWI76_RS22820 are separated by 40 nucleotides BWI76_RS22820 and BWI76_RS22825 are separated by 71 nucleotides
BWI76_RS22815: BWI76_RS22815 - hybrid sensor histidine kinase/response regulator, at 4,758,554 to 4,761,307
_RS22815
BWI76_RS22820: BWI76_RS22820 - glycerate kinase, at 4,761,348 to 4,762,487
_RS22820
BWI76_RS22825: BWI76_RS22825 - glucarate dehydratase, at 4,762,559 to 4,763,899
_RS22825
Position (kb)
4761
4762
4763 Strain fitness (log2 ratio)
-1
0
1 at 4760.412 kb on - strand, within BWI76_RS22815 at 4760.606 kb on + strand, within BWI76_RS22815 at 4760.646 kb on + strand, within BWI76_RS22815 at 4761.020 kb on - strand, within BWI76_RS22815 at 4761.096 kb on - strand at 4761.103 kb on + strand at 4761.328 kb on - strand at 4761.435 kb on - strand at 4761.571 kb on + strand, within BWI76_RS22820 at 4761.781 kb on - strand, within BWI76_RS22820 at 4761.943 kb on + strand, within BWI76_RS22820 at 4761.978 kb on + strand, within BWI76_RS22820 at 4761.978 kb on + strand, within BWI76_RS22820 at 4761.986 kb on - strand, within BWI76_RS22820 at 4762.452 kb on - strand at 4762.520 kb on - strand at 4762.647 kb on - strand at 4762.663 kb on + strand at 4762.900 kb on + strand, within BWI76_RS22825 at 4762.947 kb on + strand, within BWI76_RS22825 at 4762.947 kb on + strand, within BWI76_RS22825 at 4762.947 kb on + strand, within BWI76_RS22825 at 4762.947 kb on + strand, within BWI76_RS22825 at 4762.955 kb on - strand, within BWI76_RS22825 at 4763.004 kb on - strand, within BWI76_RS22825 at 4763.005 kb on - strand at 4763.016 kb on - strand, within BWI76_RS22825 at 4763.096 kb on + strand, within BWI76_RS22825 at 4763.109 kb on - strand, within BWI76_RS22825 at 4763.109 kb on - strand, within BWI76_RS22825 at 4763.179 kb on + strand, within BWI76_RS22825
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB16 MOI 0.1 remove 4,760,412 - BWI76_RS22815 0.67 +0.5 4,760,606 + BWI76_RS22815 0.75 -0.1 4,760,646 + BWI76_RS22815 0.76 +0.4 4,761,020 - BWI76_RS22815 0.90 -0.4 4,761,096 - -0.1 4,761,103 + +0.3 4,761,328 - +0.2 4,761,435 - +1.3 4,761,571 + BWI76_RS22820 0.20 +0.4 4,761,781 - BWI76_RS22820 0.38 +1.6 4,761,943 + BWI76_RS22820 0.52 +0.3 4,761,978 + BWI76_RS22820 0.55 -0.0 4,761,978 + BWI76_RS22820 0.55 +0.7 4,761,986 - BWI76_RS22820 0.56 +0.6 4,762,452 - -0.3 4,762,520 - -1.0 4,762,647 - +0.3 4,762,663 + +0.2 4,762,900 + BWI76_RS22825 0.25 -0.7 4,762,947 + BWI76_RS22825 0.29 +0.6 4,762,947 + BWI76_RS22825 0.29 -0.4 4,762,947 + BWI76_RS22825 0.29 -0.6 4,762,947 + BWI76_RS22825 0.29 +0.5 4,762,955 - BWI76_RS22825 0.30 +0.0 4,763,004 - BWI76_RS22825 0.33 -0.1 4,763,005 - +0.4 4,763,016 - BWI76_RS22825 0.34 -0.6 4,763,096 + BWI76_RS22825 0.40 +0.1 4,763,109 - BWI76_RS22825 0.41 -0.1 4,763,109 - BWI76_RS22825 0.41 +0.2 4,763,179 + BWI76_RS22825 0.46 +0.5
Or see this region's nucleotide sequence