Experiment: KLEB16 MOI 0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS21280 and BWI76_RS21285 are separated by 19 nucleotides BWI76_RS21285 and BWI76_RS21290 are separated by 209 nucleotides BWI76_RS21290 and BWI76_RS21295 are separated by 166 nucleotides BWI76_RS21295 and BWI76_RS21300 are separated by 36 nucleotides BWI76_RS21300 and BWI76_RS21305 overlap by 1 nucleotides
BWI76_RS21280: BWI76_RS21280 - tRNA adenosine(34) deaminase TadA, at 4,458,604 to 4,459,149
_RS21280
BWI76_RS21285: BWI76_RS21285 - HAD family hydrolase, at 4,459,169 to 4,459,804
_RS21285
BWI76_RS21290: BWI76_RS21290 - DNA-binding transcriptional regulator, at 4,460,014 to 4,460,862
_RS21290
BWI76_RS21295: BWI76_RS21295 - ferredoxin, at 4,461,029 to 4,461,289
_RS21295
BWI76_RS21300: BWI76_RS21300 - holo-ACP synthase, at 4,461,326 to 4,461,706
_RS21300
BWI76_RS21305: BWI76_RS21305 - pyridoxine 5'-phosphate synthase, at 4,461,706 to 4,462,437
_RS21305
Position (kb)
4460
4461 Strain fitness (log2 ratio)
-1
0
1
2 at 4459.171 kb on + strand at 4459.398 kb on + strand, within BWI76_RS21285 at 4459.745 kb on - strand at 4459.988 kb on + strand at 4459.996 kb on - strand at 4460.011 kb on + strand at 4460.045 kb on + strand at 4460.053 kb on - strand at 4460.053 kb on - strand at 4460.256 kb on + strand, within BWI76_RS21290 at 4460.256 kb on + strand, within BWI76_RS21290 at 4460.333 kb on - strand, within BWI76_RS21290 at 4460.531 kb on + strand, within BWI76_RS21290 at 4460.579 kb on - strand, within BWI76_RS21290 at 4460.748 kb on - strand at 4460.907 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB16 MOI 0.1 remove 4,459,171 + -0.1 4,459,398 + BWI76_RS21285 0.36 +0.5 4,459,745 - -0.5 4,459,988 + -0.5 4,459,996 - +0.0 4,460,011 + -0.5 4,460,045 + -1.0 4,460,053 - +0.1 4,460,053 - -0.3 4,460,256 + BWI76_RS21290 0.29 +2.3 4,460,256 + BWI76_RS21290 0.29 +0.2 4,460,333 - BWI76_RS21290 0.38 +2.2 4,460,531 + BWI76_RS21290 0.61 +0.7 4,460,579 - BWI76_RS21290 0.67 +0.5 4,460,748 - +0.4 4,460,907 - +0.6
Or see this region's nucleotide sequence