Experiment: KLEB16 MOI 0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS05855 and BWI76_RS05860 overlap by 4 nucleotides BWI76_RS05860 and BWI76_RS05865 are separated by 222 nucleotides
BWI76_RS05855: BWI76_RS05855 - LysR family transcriptional regulator, at 1,229,831 to 1,230,775
_RS05855
BWI76_RS05860: BWI76_RS05860 - alkanesulfonates-binding protein, at 1,230,772 to 1,231,839
_RS05860
BWI76_RS05865: BWI76_RS05865 - ABC transporter permease, at 1,232,062 to 1,233,630
_RS05865
Position (kb)
1230
1231
1232 Strain fitness (log2 ratio)
-1
0
1 at 1229.776 kb on - strand at 1229.786 kb on - strand at 1229.805 kb on + strand at 1229.813 kb on - strand at 1229.852 kb on - strand at 1229.859 kb on + strand at 1230.003 kb on + strand, within BWI76_RS05855 at 1230.026 kb on - strand, within BWI76_RS05855 at 1230.060 kb on + strand, within BWI76_RS05855 at 1230.159 kb on - strand, within BWI76_RS05855 at 1230.247 kb on - strand, within BWI76_RS05855 at 1230.253 kb on + strand, within BWI76_RS05855 at 1230.261 kb on - strand, within BWI76_RS05855 at 1230.393 kb on + strand, within BWI76_RS05855 at 1230.397 kb on - strand, within BWI76_RS05855 at 1230.476 kb on + strand, within BWI76_RS05855 at 1230.530 kb on + strand, within BWI76_RS05855 at 1230.535 kb on + strand, within BWI76_RS05855 at 1230.586 kb on - strand, within BWI76_RS05855 at 1230.911 kb on + strand, within BWI76_RS05860 at 1231.329 kb on + strand, within BWI76_RS05860 at 1231.517 kb on + strand, within BWI76_RS05860 at 1231.632 kb on + strand, within BWI76_RS05860 at 1232.345 kb on + strand, within BWI76_RS05865 at 1232.624 kb on + strand, within BWI76_RS05865 at 1232.639 kb on + strand, within BWI76_RS05865 at 1232.655 kb on + strand, within BWI76_RS05865 at 1232.785 kb on - strand, within BWI76_RS05865
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB16 MOI 0.1 remove 1,229,776 - -0.4 1,229,786 - -0.1 1,229,805 + -0.4 1,229,813 - -0.4 1,229,852 - -0.5 1,229,859 + -0.6 1,230,003 + BWI76_RS05855 0.18 -1.3 1,230,026 - BWI76_RS05855 0.21 -0.5 1,230,060 + BWI76_RS05855 0.24 +0.4 1,230,159 - BWI76_RS05855 0.35 +0.3 1,230,247 - BWI76_RS05855 0.44 -0.4 1,230,253 + BWI76_RS05855 0.45 -0.1 1,230,261 - BWI76_RS05855 0.46 -0.0 1,230,393 + BWI76_RS05855 0.59 -0.5 1,230,397 - BWI76_RS05855 0.60 -0.3 1,230,476 + BWI76_RS05855 0.68 +0.3 1,230,530 + BWI76_RS05855 0.74 -0.5 1,230,535 + BWI76_RS05855 0.74 +0.8 1,230,586 - BWI76_RS05855 0.80 -0.3 1,230,911 + BWI76_RS05860 0.13 -1.5 1,231,329 + BWI76_RS05860 0.52 -0.5 1,231,517 + BWI76_RS05860 0.70 -0.4 1,231,632 + BWI76_RS05860 0.81 -0.4 1,232,345 + BWI76_RS05865 0.18 -0.4 1,232,624 + BWI76_RS05865 0.36 +0.1 1,232,639 + BWI76_RS05865 0.37 -0.0 1,232,655 + BWI76_RS05865 0.38 -0.2 1,232,785 - BWI76_RS05865 0.46 -0.8
Or see this region's nucleotide sequence