Experiment: KLEB16 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS25155 and BWI76_RS25160 are separated by 152 nucleotides BWI76_RS25160 and BWI76_RS25165 are separated by 233 nucleotides BWI76_RS25165 and BWI76_RS25170 are separated by 46 nucleotides
BWI76_RS25155: BWI76_RS25155 - RNA-binding protein, at 5,235,174 to 5,235,467
_RS25155
BWI76_RS25160: BWI76_RS25160 - transcription elongation factor GreA, at 5,235,620 to 5,236,096
_RS25160
BWI76_RS25165: BWI76_RS25165 - serine-type D-Ala-D-Ala carboxypeptidase, at 5,236,330 to 5,237,763
_RS25165
BWI76_RS25170: BWI76_RS25170 - GTPase ObgE, at 5,237,810 to 5,238,982
_RS25170
Position (kb)
5236
5237
5238 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 5235.956 kb on - strand, within BWI76_RS25160 at 5236.079 kb on + strand at 5236.129 kb on + strand at 5236.208 kb on - strand at 5236.375 kb on - strand at 5236.414 kb on - strand at 5236.548 kb on + strand, within BWI76_RS25165 at 5236.617 kb on + strand, within BWI76_RS25165 at 5236.727 kb on + strand, within BWI76_RS25165 at 5236.752 kb on - strand, within BWI76_RS25165 at 5236.868 kb on - strand, within BWI76_RS25165 at 5237.142 kb on - strand, within BWI76_RS25165 at 5237.292 kb on - strand, within BWI76_RS25165 at 5237.347 kb on - strand, within BWI76_RS25165 at 5237.524 kb on + strand, within BWI76_RS25165 at 5237.547 kb on - strand, within BWI76_RS25165 at 5237.607 kb on - strand, within BWI76_RS25165 at 5237.913 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB16 MOI 1 remove 5,235,956 - BWI76_RS25160 0.70 +0.8 5,236,079 + +0.8 5,236,129 + +0.4 5,236,208 - +1.2 5,236,375 - +0.6 5,236,414 - -0.1 5,236,548 + BWI76_RS25165 0.15 +0.9 5,236,617 + BWI76_RS25165 0.20 +0.5 5,236,727 + BWI76_RS25165 0.28 +0.8 5,236,752 - BWI76_RS25165 0.29 +2.3 5,236,868 - BWI76_RS25165 0.38 +0.7 5,237,142 - BWI76_RS25165 0.57 -1.8 5,237,292 - BWI76_RS25165 0.67 +1.3 5,237,347 - BWI76_RS25165 0.71 +0.7 5,237,524 + BWI76_RS25165 0.83 +0.4 5,237,547 - BWI76_RS25165 0.85 +0.9 5,237,607 - BWI76_RS25165 0.89 +1.0 5,237,913 - -2.4
Or see this region's nucleotide sequence