Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS10280
Experiment: KLEB16 MOI 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | KLEB16 MOI 1 |
---|---|---|---|---|---|
remove | |||||
2,176,089 | - | BWI76_RS10270 | 0.80 | +0.4 | |
2,176,116 | - | BWI76_RS10270 | 0.83 | -0.2 | |
2,176,353 | + | +0.8 | |||
2,176,494 | - | BWI76_RS10275 | 0.22 | -1.2 | |
2,176,517 | - | BWI76_RS10275 | 0.25 | -0.1 | |
2,176,813 | + | BWI76_RS10275 | 0.65 | -1.8 | |
2,176,990 | + | BWI76_RS10275 | 0.89 | -0.4 | |
2,177,183 | + | BWI76_RS10280 | 0.15 | +1.1 | |
2,177,191 | - | BWI76_RS10280 | 0.17 | +2.4 | |
2,177,663 | + | BWI76_RS10280 | 0.82 | -0.4 | |
2,177,696 | + | BWI76_RS10280 | 0.86 | -3.0 | |
2,177,701 | + | BWI76_RS10280 | 0.87 | +0.1 | |
2,177,706 | + | BWI76_RS10280 | 0.87 | +0.5 | |
2,177,793 | + | -0.7 | |||
2,177,981 | - | BWI76_RS10285 | 0.19 | +0.8 | |
2,178,350 | - | BWI76_RS10285 | 0.65 | -0.7 | |
2,178,471 | + | BWI76_RS10285 | 0.79 | +0.1 | |
2,178,488 | - | BWI76_RS10285 | 0.82 | +0.2 |
Or see this region's nucleotide sequence