Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS06035

Experiment: KLEB16 MOI 1

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS06030 and BWI76_RS06035 are separated by 89 nucleotidesBWI76_RS06035 and BWI76_RS06040 are separated by 11 nucleotides BWI76_RS06030: BWI76_RS06030 - homocysteine S-methyltransferase, at 1,265,830 to 1,266,762 _RS06030 BWI76_RS06035: BWI76_RS06035 - ferric transporter ATP-binding subunit, at 1,266,852 to 1,267,898 _RS06035 BWI76_RS06040: BWI76_RS06040 - iron ABC transporter permease, at 1,267,910 to 1,269,988 _RS06040 Position (kb) 1266 1267 1268Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 1265.929 kb on - strand, within BWI76_RS06030at 1265.977 kb on - strand, within BWI76_RS06030at 1266.125 kb on + strand, within BWI76_RS06030at 1266.148 kb on - strand, within BWI76_RS06030at 1266.405 kb on + strand, within BWI76_RS06030at 1266.410 kb on + strand, within BWI76_RS06030at 1266.410 kb on + strand, within BWI76_RS06030at 1266.410 kb on + strand, within BWI76_RS06030at 1266.418 kb on - strand, within BWI76_RS06030at 1266.418 kb on - strand, within BWI76_RS06030at 1266.764 kb on - strandat 1266.764 kb on - strandat 1266.786 kb on + strandat 1266.804 kb on - strandat 1266.831 kb on - strandat 1267.007 kb on - strand, within BWI76_RS06035at 1267.073 kb on - strand, within BWI76_RS06035at 1267.399 kb on + strand, within BWI76_RS06035at 1267.506 kb on - strand, within BWI76_RS06035at 1267.872 kb on - strandat 1268.064 kb on - strandat 1268.537 kb on - strand, within BWI76_RS06040at 1268.586 kb on + strand, within BWI76_RS06040at 1268.652 kb on + strand, within BWI76_RS06040at 1268.665 kb on - strand, within BWI76_RS06040

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Per-strain Table

Position Strand Gene LocusTag Fraction KLEB16 MOI 1
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1,265,929 - BWI76_RS06030 0.11 -0.6
1,265,977 - BWI76_RS06030 0.16 -1.2
1,266,125 + BWI76_RS06030 0.32 +1.4
1,266,148 - BWI76_RS06030 0.34 -2.1
1,266,405 + BWI76_RS06030 0.62 -1.7
1,266,410 + BWI76_RS06030 0.62 -2.1
1,266,410 + BWI76_RS06030 0.62 -0.5
1,266,410 + BWI76_RS06030 0.62 -0.3
1,266,418 - BWI76_RS06030 0.63 -1.1
1,266,418 - BWI76_RS06030 0.63 -2.9
1,266,764 - -0.0
1,266,764 - +0.5
1,266,786 + -0.2
1,266,804 - -0.1
1,266,831 - -2.0
1,267,007 - BWI76_RS06035 0.15 -0.4
1,267,073 - BWI76_RS06035 0.21 -0.7
1,267,399 + BWI76_RS06035 0.52 -1.5
1,267,506 - BWI76_RS06035 0.62 -1.2
1,267,872 - +0.0
1,268,064 - +0.3
1,268,537 - BWI76_RS06040 0.30 -0.1
1,268,586 + BWI76_RS06040 0.33 -1.3
1,268,652 + BWI76_RS06040 0.36 +1.9
1,268,665 - BWI76_RS06040 0.36 -0.3

Or see this region's nucleotide sequence