Experiment: KLEB16 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS06030 and BWI76_RS06035 are separated by 89 nucleotides BWI76_RS06035 and BWI76_RS06040 are separated by 11 nucleotides
BWI76_RS06030: BWI76_RS06030 - homocysteine S-methyltransferase, at 1,265,830 to 1,266,762
_RS06030
BWI76_RS06035: BWI76_RS06035 - ferric transporter ATP-binding subunit, at 1,266,852 to 1,267,898
_RS06035
BWI76_RS06040: BWI76_RS06040 - iron ABC transporter permease, at 1,267,910 to 1,269,988
_RS06040
Position (kb)
1266
1267
1268 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1265.929 kb on - strand, within BWI76_RS06030 at 1265.977 kb on - strand, within BWI76_RS06030 at 1266.125 kb on + strand, within BWI76_RS06030 at 1266.148 kb on - strand, within BWI76_RS06030 at 1266.405 kb on + strand, within BWI76_RS06030 at 1266.410 kb on + strand, within BWI76_RS06030 at 1266.410 kb on + strand, within BWI76_RS06030 at 1266.410 kb on + strand, within BWI76_RS06030 at 1266.418 kb on - strand, within BWI76_RS06030 at 1266.418 kb on - strand, within BWI76_RS06030 at 1266.764 kb on - strand at 1266.764 kb on - strand at 1266.786 kb on + strand at 1266.804 kb on - strand at 1266.831 kb on - strand at 1267.007 kb on - strand, within BWI76_RS06035 at 1267.073 kb on - strand, within BWI76_RS06035 at 1267.399 kb on + strand, within BWI76_RS06035 at 1267.506 kb on - strand, within BWI76_RS06035 at 1267.872 kb on - strand at 1268.064 kb on - strand at 1268.537 kb on - strand, within BWI76_RS06040 at 1268.586 kb on + strand, within BWI76_RS06040 at 1268.652 kb on + strand, within BWI76_RS06040 at 1268.665 kb on - strand, within BWI76_RS06040
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB16 MOI 1 remove 1,265,929 - BWI76_RS06030 0.11 -0.6 1,265,977 - BWI76_RS06030 0.16 -1.2 1,266,125 + BWI76_RS06030 0.32 +1.4 1,266,148 - BWI76_RS06030 0.34 -2.1 1,266,405 + BWI76_RS06030 0.62 -1.7 1,266,410 + BWI76_RS06030 0.62 -2.1 1,266,410 + BWI76_RS06030 0.62 -0.5 1,266,410 + BWI76_RS06030 0.62 -0.3 1,266,418 - BWI76_RS06030 0.63 -1.1 1,266,418 - BWI76_RS06030 0.63 -2.9 1,266,764 - -0.0 1,266,764 - +0.5 1,266,786 + -0.2 1,266,804 - -0.1 1,266,831 - -2.0 1,267,007 - BWI76_RS06035 0.15 -0.4 1,267,073 - BWI76_RS06035 0.21 -0.7 1,267,399 + BWI76_RS06035 0.52 -1.5 1,267,506 - BWI76_RS06035 0.62 -1.2 1,267,872 - +0.0 1,268,064 - +0.3 1,268,537 - BWI76_RS06040 0.30 -0.1 1,268,586 + BWI76_RS06040 0.33 -1.3 1,268,652 + BWI76_RS06040 0.36 +1.9 1,268,665 - BWI76_RS06040 0.36 -0.3
Or see this region's nucleotide sequence