Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS18965

Experiment: KLEB16 MOI 10

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KLEB16 MOI 10
3,932,196	+		BWI76_RS18960	0.36	-3.1
3,932,196	+		BWI76_RS18960	0.36	-0.1
3,932,196	+		BWI76_RS18960	0.36	-0.7
3,932,196	+		BWI76_RS18960	0.36	+0.1
3,932,204	-		BWI76_RS18960	0.36	+0.1
3,932,204	-		BWI76_RS18960	0.36	-0.1
3,932,311	-		BWI76_RS18960	0.44	+0.4
3,932,311	-		BWI76_RS18960	0.44	-3.1
3,932,317	+		BWI76_RS18960	0.45	+0.5
3,932,326	-		BWI76_RS18960	0.45	+1.6
3,932,338	+		BWI76_RS18960	0.46	-0.9
3,932,341	+		BWI76_RS18960	0.47	-0.7
3,932,346	+		BWI76_RS18960	0.47	-1.2
3,932,346	+		BWI76_RS18960	0.47	-0.9
3,932,346	+		BWI76_RS18960	0.47	+1.2
3,932,346	+		BWI76_RS18960	0.47	-0.2
3,932,346	+		BWI76_RS18960	0.47	+1.1
3,932,346	+		BWI76_RS18960	0.47	-1.3
3,932,354	-		BWI76_RS18960	0.48	-0.0
3,932,354	-		BWI76_RS18960	0.48	+0.1
3,932,355	-		BWI76_RS18960	0.48	+0.7
3,932,444	-		BWI76_RS18960	0.54	+2.0
3,932,463	-		BWI76_RS18960	0.56	+0.6
3,932,463	-				+0.7
3,932,480	+		BWI76_RS18960	0.57	+0.1
3,932,513	-		BWI76_RS18960	0.60	+0.6
3,932,516	+		BWI76_RS18960	0.60	-0.3
3,932,516	+		BWI76_RS18960	0.60	+1.9
3,932,524	-		BWI76_RS18960	0.60	+1.3
3,932,524	-		BWI76_RS18960	0.60	+3.4
3,932,524	-		BWI76_RS18960	0.60	+0.9
3,932,570	+		BWI76_RS18960	0.64	+1.7
3,932,578	-		BWI76_RS18960	0.65	+2.1
3,932,585	-		BWI76_RS18960	0.65	-2.3
3,932,624	+		BWI76_RS18960	0.68	+0.5
3,932,624	+				+2.7
3,932,629	+		BWI76_RS18960	0.68	+0.5
3,932,632	-		BWI76_RS18960	0.69	+0.3
3,932,637	-		BWI76_RS18960	0.69	-2.3
3,932,651	-		BWI76_RS18960	0.70	-1.7
3,932,666	+		BWI76_RS18960	0.71	+1.1
3,932,678	-		BWI76_RS18960	0.72	+0.6
3,932,678	-		BWI76_RS18960	0.72	+1.7
3,932,685	-		BWI76_RS18960	0.73	-1.0
3,932,688	-		BWI76_RS18960	0.73	-0.1
3,932,688	-		BWI76_RS18960	0.73	+1.0
3,932,700	-		BWI76_RS18960	0.74	-0.5
3,932,702	+		BWI76_RS18960	0.74	+0.7
3,932,702	+		BWI76_RS18960	0.74	+0.7
3,932,702	+		BWI76_RS18960	0.74	+0.3
3,932,702	+		BWI76_RS18960	0.74	+0.3
3,932,702	+		BWI76_RS18960	0.74	+0.5
3,932,702	+		BWI76_RS18960	0.74	+0.1
3,932,702	+		BWI76_RS18960	0.74	-0.5
3,932,702	+		BWI76_RS18960	0.74	+0.2
3,932,702	+		BWI76_RS18960	0.74	-1.8
3,932,702	+		BWI76_RS18960	0.74	-0.6
3,932,702	+		BWI76_RS18960	0.74	+3.4
3,932,702	+		BWI76_RS18960	0.74	+0.6
3,932,702	+		BWI76_RS18960	0.74	+1.1
3,932,702	+		BWI76_RS18960	0.74	+0.4
3,932,702	+		BWI76_RS18960	0.74	+1.0
3,932,702	+		BWI76_RS18960	0.74	-0.4
3,932,702	+		BWI76_RS18960	0.74	+1.6
3,932,710	-		BWI76_RS18960	0.75	-0.1
3,932,710	-		BWI76_RS18960	0.75	-0.8
3,932,710	-		BWI76_RS18960	0.75	+2.9
3,932,710	-		BWI76_RS18960	0.75	-0.3
3,932,710	-		BWI76_RS18960	0.75	-0.5
3,932,710	-		BWI76_RS18960	0.75	+0.0
3,932,710	-		BWI76_RS18960	0.75	+0.7
3,932,710	-		BWI76_RS18960	0.75	+0.5
3,932,710	-		BWI76_RS18960	0.75	-0.0
3,932,710	-		BWI76_RS18960	0.75	+0.6
3,932,710	-		BWI76_RS18960	0.75	+1.1
3,932,710	-		BWI76_RS18960	0.75	+0.1
3,932,710	-		BWI76_RS18960	0.75	-0.3
3,932,710	-		BWI76_RS18960	0.75	+0.5
3,932,710	-		BWI76_RS18960	0.75	-3.3
3,932,710	-		BWI76_RS18960	0.75	-0.2
3,932,710	-		BWI76_RS18960	0.75	-0.1
3,932,710	-		BWI76_RS18960	0.75	+0.7
3,932,710	-		BWI76_RS18960	0.75	+1.1
3,932,710	-		BWI76_RS18960	0.75	+0.1
3,932,710	-				+3.8
3,932,710	-		BWI76_RS18960	0.75	+0.9
3,932,711	-		BWI76_RS18960	0.75	-0.2
3,932,725	-		BWI76_RS18960	0.76	+0.7
3,932,752	-		BWI76_RS18960	0.78	+0.3
3,932,795	-		BWI76_RS18960	0.81	-0.1
3,932,827	-		BWI76_RS18960	0.83	-0.3
3,932,843	-		BWI76_RS18960	0.85	+2.2
3,932,854	-		BWI76_RS18960	0.85	+0.4
3,932,890	-		BWI76_RS18960	0.88	-0.0
3,932,958	-				+1.6
3,933,000	-				+0.7
3,933,026	-				-0.6
3,933,026	-				+0.0
3,933,026	-				+0.1
3,933,026	-				+0.8
3,933,026	-				-0.8
3,933,026	-				-2.5
3,933,026	-				+0.5
3,933,114	-				-1.5
3,933,114	-				+0.1
3,933,116	-				-0.3
3,933,132	+				-2.0
3,933,166	-				+0.9
3,933,173	-				-0.8
3,933,185	-				-0.7
3,933,185	-				+4.2
3,933,185	-				-1.2
3,933,185	-				+1.7
3,933,190	-				-0.4
3,933,190	-				+0.7
3,933,195	-				+2.9
3,933,206	-				-0.8
3,933,214	-				-2.3
3,933,229	-				-0.7
3,933,285	-				+0.3
3,933,332	-		BWI76_RS18965	0.13	+0.9
3,933,347	-		BWI76_RS18965	0.15	+0.4
3,933,382	+		BWI76_RS18965	0.18	+1.1
3,933,390	-		BWI76_RS18965	0.19	-0.3
3,933,390	-		BWI76_RS18965	0.19	+2.1
3,933,392	+		BWI76_RS18965	0.19	-1.7
3,933,392	+		BWI76_RS18965	0.19	-1.0
3,933,400	+		BWI76_RS18965	0.19	-0.3
3,933,400	+		BWI76_RS18965	0.19	+3.1
3,933,400	-		BWI76_RS18965	0.19	-0.2
3,933,402	-		BWI76_RS18965	0.20	+0.4
3,933,408	-		BWI76_RS18965	0.20	-0.7
3,933,408	-		BWI76_RS18965	0.20	+0.3
3,933,408	-		BWI76_RS18965	0.20	-0.3
3,933,411	+		BWI76_RS18965	0.20	-2.2
3,933,411	+				+0.3
3,933,411	+		BWI76_RS18965	0.20	-1.2
3,933,411	+		BWI76_RS18965	0.20	+0.4
3,933,419	-		BWI76_RS18965	0.21	+0.2
3,933,419	-		BWI76_RS18965	0.21	-0.4
3,933,419	-		BWI76_RS18965	0.21	+0.9
3,933,419	-		BWI76_RS18965	0.21	+1.4
3,933,424	-		BWI76_RS18965	0.22	+1.3
3,933,443	-		BWI76_RS18965	0.23	+0.8
3,933,443	-		BWI76_RS18965	0.23	+0.3
3,933,445	+		BWI76_RS18965	0.23	+1.7
3,933,460	+		BWI76_RS18965	0.25	+3.1
3,933,468	-		BWI76_RS18965	0.25	-0.1
3,933,468	-		BWI76_RS18965	0.25	+0.3
3,933,479	-		BWI76_RS18965	0.26	+0.1
3,933,481	+		BWI76_RS18965	0.27	+1.3
3,933,489	+		BWI76_RS18965	0.27	+0.1
3,933,489	+		BWI76_RS18965	0.27	-1.3
3,933,489	-		BWI76_RS18965	0.27	-0.0
3,933,497	-		BWI76_RS18965	0.28	+0.4
3,933,508	+		BWI76_RS18965	0.29	-2.2
3,933,508	+		BWI76_RS18965	0.29	-0.1
3,933,517	+		BWI76_RS18965	0.30	+2.4
3,933,517	+		BWI76_RS18965	0.30	+0.5
3,933,517	+		BWI76_RS18965	0.30	-1.1
3,933,525	-		BWI76_RS18965	0.31	-1.0
3,933,525	-		BWI76_RS18965	0.31	+1.7
3,933,525	-		BWI76_RS18965	0.31	-0.3
3,933,525	-		BWI76_RS18965	0.31	-0.5
3,933,525	-		BWI76_RS18965	0.31	-0.3
3,933,529	+		BWI76_RS18965	0.31	+0.7
3,933,529	+		BWI76_RS18965	0.31	+1.4
3,933,537	-		BWI76_RS18965	0.32	+1.1
3,933,537	-		BWI76_RS18965	0.32	+0.6
3,933,545	-		BWI76_RS18965	0.32	+2.0
3,933,552	+		BWI76_RS18965	0.33	+0.1
3,933,560	+		BWI76_RS18965	0.34	+1.3
3,933,560	+		BWI76_RS18965	0.34	-0.9
3,933,560	-		BWI76_RS18965	0.34	+1.8
3,933,560	-		BWI76_RS18965	0.34	-0.3
3,933,560	-		BWI76_RS18965	0.34	+0.1
3,933,560	-		BWI76_RS18965	0.34	+0.5
3,933,581	+		BWI76_RS18965	0.35	-2.4
3,933,615	-		BWI76_RS18965	0.38	+1.2
3,933,694	-		BWI76_RS18965	0.45	+1.3
3,933,695	-		BWI76_RS18965	0.46	+0.2
3,933,696	-		BWI76_RS18965	0.46	+1.5
3,933,701	-		BWI76_RS18965	0.46	-0.6
3,933,701	-		BWI76_RS18965	0.46	-0.4
3,933,708	-		BWI76_RS18965	0.47	+0.3
3,933,708	-		BWI76_RS18965	0.47	+0.8
3,933,708	-		BWI76_RS18965	0.47	+0.2
3,933,708	-		BWI76_RS18965	0.47	+1.7
3,933,708	-		BWI76_RS18965	0.47	+0.4
3,933,718	-		BWI76_RS18965	0.48	+0.1
3,933,721	-		BWI76_RS18965	0.48	+0.3
3,933,738	-		BWI76_RS18965	0.49	+0.2
3,933,738	-		BWI76_RS18965	0.49	+0.4
3,933,740	-		BWI76_RS18965	0.49	-0.8
3,933,740	-		BWI76_RS18965	0.49	-0.5
3,933,745	-		BWI76_RS18965	0.50	+0.7
3,933,778	-		BWI76_RS18965	0.53	+3.7
3,933,778	-		BWI76_RS18965	0.53	+0.5
3,933,778	-		BWI76_RS18965	0.53	+0.1
3,933,800	-		BWI76_RS18965	0.55	+2.5
3,933,868	-		BWI76_RS18965	0.61	+0.9
3,933,870	-		BWI76_RS18965	0.61	-0.3
3,933,894	-		BWI76_RS18965	0.63	+1.4
3,933,901	-		BWI76_RS18965	0.64	+0.4
3,933,932	-		BWI76_RS18965	0.66	-0.3
3,933,932	-		BWI76_RS18965	0.66	+0.6
3,933,933	-		BWI76_RS18965	0.66	+2.7
3,933,933	-		BWI76_RS18965	0.66	+0.8
3,933,967	-		BWI76_RS18965	0.69	-0.4
3,934,027	-		BWI76_RS18965	0.75	+1.3
3,934,032	-		BWI76_RS18965	0.75	+0.3
3,934,032	-		BWI76_RS18965	0.75	+0.6
3,934,032	-		BWI76_RS18965	0.75	-0.2
3,934,032	-		BWI76_RS18965	0.75	-0.0
3,934,042	-		BWI76_RS18965	0.76	-0.3
3,934,044	-		BWI76_RS18965	0.76	+0.5
3,934,044	-		BWI76_RS18965	0.76	+0.4
3,934,044	-		BWI76_RS18965	0.76	-0.4
3,934,054	-		BWI76_RS18965	0.77	-0.4
3,934,059	+		BWI76_RS18965	0.78	+0.7
3,934,067	-		BWI76_RS18965	0.78	-0.9
3,934,067	-		BWI76_RS18965	0.78	+0.5
3,934,067	-		BWI76_RS18965	0.78	+1.3
3,934,125	-		BWI76_RS18965	0.83	+0.8
3,934,146	-		BWI76_RS18965	0.85	-0.1
3,934,238	+				-0.3
3,934,257	+				+0.8
3,934,260	-				+0.9
3,934,260	-				+1.3
3,934,260	-				+1.2
3,934,260	-				-1.0
3,934,260	-				+0.5
3,934,265	-				-2.9
3,934,265	-				-0.1
3,934,265	-				+2.3
3,934,265	-				+0.2
3,934,265	-				-1.2
3,934,322	-				-1.2
3,934,356	-				-0.1
3,934,356	-				-0.1
3,934,356	-				-0.8
3,934,356	-				+0.2
3,934,360	+				+0.7
3,934,368	-				-2.6
3,934,368	-				+0.3
3,934,525	-		BWI76_RS18970	0.22	+0.5
3,934,525	-		BWI76_RS18970	0.22	+0.6
3,934,553	-		BWI76_RS18970	0.26	-3.8
3,934,558	-		BWI76_RS18970	0.26	+0.8
3,934,558	-		BWI76_RS18970	0.26	-0.2
3,934,558	-		BWI76_RS18970	0.26	+1.3
3,934,585	-		BWI76_RS18970	0.29	-0.6
3,934,618	-				+3.7
3,934,622	-		BWI76_RS18970	0.33	+2.0
3,934,663	-		BWI76_RS18970	0.38	+0.4
3,934,699	-		BWI76_RS18970	0.42	-0.1
3,934,738	-		BWI76_RS18970	0.46	-0.3
3,934,738	-		BWI76_RS18970	0.46	-1.1
3,934,770	-				-0.7
3,934,789	+		BWI76_RS18970	0.52	-2.6
3,934,789	+		BWI76_RS18970	0.52	+0.9
3,934,789	+		BWI76_RS18970	0.52	+0.3
3,934,797	-		BWI76_RS18970	0.53	+0.8
3,934,797	-		BWI76_RS18970	0.53	-0.2
3,934,797	-		BWI76_RS18970	0.53	+0.7
3,934,797	-		BWI76_RS18970	0.53	+0.1
3,934,797	-		BWI76_RS18970	0.53	+0.7
3,934,798	-		BWI76_RS18970	0.53	+0.7
3,934,842	+		BWI76_RS18970	0.58	-2.3
3,934,878	+		BWI76_RS18970	0.62	-3.0
3,934,883	-		BWI76_RS18970	0.62	+0.3
3,934,890	+		BWI76_RS18970	0.63	-2.0
3,934,896	+		BWI76_RS18970	0.64	-2.6
3,934,896	+		BWI76_RS18970	0.64	+2.8
3,934,896	+		BWI76_RS18970	0.64	-0.7
3,934,898	-		BWI76_RS18970	0.64	+1.9
3,934,898	-		BWI76_RS18970	0.64	+0.5
3,934,904	-		BWI76_RS18970	0.65	-0.8
3,934,938	+		BWI76_RS18970	0.69	-2.0
3,934,943	+		BWI76_RS18970	0.69	-0.9
3,934,946	-		BWI76_RS18970	0.69	+0.7
3,934,946	-		BWI76_RS18970	0.69	-0.8
3,934,946	-		BWI76_RS18970	0.69	-0.4
3,934,946	-		BWI76_RS18970	0.69	-0.3
3,934,951	-		BWI76_RS18970	0.70	-1.2
3,934,951	-		BWI76_RS18970	0.70	+2.7
3,934,959	+		BWI76_RS18970	0.71	+2.2
3,935,007	+		BWI76_RS18970	0.76	+0.1
3,935,007	+		BWI76_RS18970	0.76	-0.6
3,935,015	-		BWI76_RS18970	0.77	+0.9
3,935,031	+		BWI76_RS18970	0.79	+0.7
3,935,039	-		BWI76_RS18970	0.80	+1.7
3,935,053	-		BWI76_RS18970	0.81	-0.6
3,935,068	+		BWI76_RS18970	0.83	+1.1
3,935,068	+		BWI76_RS18970	0.83	+1.7
3,935,068	+		BWI76_RS18970	0.83	-2.2
3,935,072	+		BWI76_RS18970	0.84	+1.2
3,935,072	+		BWI76_RS18970	0.84	+0.5
3,935,082	+		BWI76_RS18970	0.85	+1.0
3,935,085	-		BWI76_RS18970	0.85	+0.6
3,935,087	+		BWI76_RS18970	0.85	+0.4
3,935,087	+		BWI76_RS18970	0.85	+0.0
3,935,089	+		BWI76_RS18970	0.85	-1.5
3,935,093	+		BWI76_RS18970	0.86	+0.2
3,935,095	-		BWI76_RS18970	0.86	+0.2
3,935,095	-		BWI76_RS18970	0.86	+0.8
3,935,097	-		BWI76_RS18970	0.86	+1.1
3,935,109	-		BWI76_RS18970	0.88	+0.7
3,935,131	-				+0.1
3,935,159	-				+0.3
3,935,193	-				+0.4
3,935,221	-				+0.7
3,935,229	-				+0.1
3,935,236	-				-0.4
3,935,238	-				+0.6
3,935,253	-				+1.7
3,935,267	+				+1.7
3,935,267	-				-0.5
3,935,275	-				+0.2
3,935,283	-				+3.0