Experiment: KLEB15 MOI 0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS16685 and BWI76_RS16690 overlap by 1 nucleotides BWI76_RS16690 and BWI76_RS16695 overlap by 4 nucleotides BWI76_RS16695 and BWI76_RS16700 overlap by 4 nucleotides
BWI76_RS16685: BWI76_RS16685 - peptide ABC transporter permease, at 3,453,642 to 3,454,601
_RS16685
BWI76_RS16690: BWI76_RS16690 - peptide ABC transporter permease, at 3,454,601 to 3,455,548
_RS16690
BWI76_RS16695: BWI76_RS16695 - dipeptide/oligopeptide/nickel ABC transporter ATP-binding protein, at 3,455,545 to 3,456,525
_RS16695
BWI76_RS16700: BWI76_RS16700 - ABC transporter ATP-binding protein, at 3,456,522 to 3,457,487
_RS16700
Position (kb)
3454
3455
3456 Strain fitness (log2 ratio)
-1
0
1 at 3453.767 kb on - strand, within BWI76_RS16685 at 3454.365 kb on - strand, within BWI76_RS16685 at 3454.377 kb on - strand at 3454.628 kb on - strand at 3454.952 kb on - strand, within BWI76_RS16690 at 3455.202 kb on + strand, within BWI76_RS16690 at 3455.311 kb on + strand, within BWI76_RS16690 at 3455.667 kb on - strand, within BWI76_RS16695 at 3455.711 kb on - strand, within BWI76_RS16695 at 3455.942 kb on + strand at 3455.950 kb on - strand, within BWI76_RS16695 at 3456.156 kb on + strand, within BWI76_RS16695 at 3456.200 kb on - strand, within BWI76_RS16695 at 3456.226 kb on + strand, within BWI76_RS16695 at 3456.433 kb on + strand at 3456.441 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB15 MOI 0.1 remove 3,453,767 - BWI76_RS16685 0.13 -0.3 3,454,365 - BWI76_RS16685 0.75 -1.2 3,454,377 - +0.7 3,454,628 - -0.1 3,454,952 - BWI76_RS16690 0.37 -1.3 3,455,202 + BWI76_RS16690 0.63 -0.7 3,455,311 + BWI76_RS16690 0.75 -0.2 3,455,667 - BWI76_RS16695 0.12 -0.1 3,455,711 - BWI76_RS16695 0.17 +0.4 3,455,942 + +1.7 3,455,950 - BWI76_RS16695 0.41 +1.5 3,456,156 + BWI76_RS16695 0.62 -0.2 3,456,200 - BWI76_RS16695 0.67 +1.2 3,456,226 + BWI76_RS16695 0.69 -0.5 3,456,433 + +0.1 3,456,441 - -0.3
Or see this region's nucleotide sequence