Experiment: KLEB15 MOI 0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS06630 and BWI76_RS06635 are separated by 37 nucleotides BWI76_RS06635 and BWI76_RS06640 are separated by 65 nucleotides BWI76_RS06640 and BWI76_RS06650 are separated by 661 nucleotides BWI76_RS06650 and BWI76_RS06655 overlap by 4 nucleotides
BWI76_RS06630: BWI76_RS06630 - hypothetical protein, at 1,394,032 to 1,394,541
_RS06630
BWI76_RS06635: BWI76_RS06635 - methylated-DNA--protein-cysteine methyltransferase, at 1,394,579 to 1,394,890
_RS06635
BWI76_RS06640: BWI76_RS06640 - hypothetical protein, at 1,394,956 to 1,395,363
_RS06640
BWI76_RS06650: BWI76_RS06650 - hypothetical protein, at 1,396,025 to 1,396,282
_RS06650
BWI76_RS06655: BWI76_RS06655 - hypothetical protein, at 1,396,279 to 1,396,494
_RS06655
Position (kb)
1394
1395
1396 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 1393.992 kb on + strand at 1394.151 kb on + strand, within BWI76_RS06630 at 1394.325 kb on + strand, within BWI76_RS06630 at 1394.387 kb on + strand, within BWI76_RS06630 at 1394.439 kb on - strand, within BWI76_RS06630 at 1394.531 kb on - strand at 1394.627 kb on + strand, within BWI76_RS06635 at 1394.735 kb on + strand, within BWI76_RS06635 at 1394.744 kb on - strand, within BWI76_RS06635 at 1395.082 kb on - strand, within BWI76_RS06640 at 1395.101 kb on + strand, within BWI76_RS06640 at 1395.192 kb on + strand, within BWI76_RS06640 at 1395.192 kb on + strand, within BWI76_RS06640 at 1395.197 kb on + strand, within BWI76_RS06640 at 1395.197 kb on + strand, within BWI76_RS06640 at 1395.210 kb on - strand, within BWI76_RS06640 at 1395.224 kb on - strand, within BWI76_RS06640 at 1395.328 kb on + strand at 1395.336 kb on - strand at 1395.718 kb on + strand at 1395.732 kb on + strand at 1395.758 kb on + strand at 1395.766 kb on - strand at 1395.766 kb on - strand at 1395.904 kb on - strand at 1395.938 kb on + strand at 1396.022 kb on + strand at 1396.022 kb on + strand at 1396.022 kb on + strand at 1396.022 kb on + strand at 1396.022 kb on + strand at 1396.023 kb on + strand at 1396.027 kb on + strand at 1396.030 kb on - strand at 1396.030 kb on - strand at 1396.030 kb on - strand at 1396.032 kb on + strand at 1396.032 kb on + strand at 1396.035 kb on - strand at 1396.037 kb on + strand at 1396.037 kb on + strand at 1396.040 kb on - strand at 1396.124 kb on + strand, within BWI76_RS06650 at 1396.124 kb on - strand, within BWI76_RS06650 at 1396.130 kb on + strand, within BWI76_RS06650 at 1396.135 kb on + strand, within BWI76_RS06650 at 1396.135 kb on + strand, within BWI76_RS06650 at 1396.135 kb on + strand, within BWI76_RS06650 at 1396.135 kb on + strand, within BWI76_RS06650 at 1396.135 kb on + strand, within BWI76_RS06650 at 1396.135 kb on + strand, within BWI76_RS06650 at 1396.135 kb on + strand, within BWI76_RS06650 at 1396.136 kb on + strand, within BWI76_RS06650 at 1396.136 kb on + strand, within BWI76_RS06650 at 1396.136 kb on + strand, within BWI76_RS06650 at 1396.136 kb on + strand, within BWI76_RS06650 at 1396.136 kb on + strand, within BWI76_RS06650 at 1396.136 kb on + strand, within BWI76_RS06650 at 1396.136 kb on + strand, within BWI76_RS06650 at 1396.136 kb on + strand, within BWI76_RS06650 at 1396.136 kb on + strand at 1396.136 kb on + strand, within BWI76_RS06650 at 1396.136 kb on + strand, within BWI76_RS06650 at 1396.136 kb on + strand, within BWI76_RS06650 at 1396.136 kb on + strand, within BWI76_RS06650 at 1396.136 kb on + strand at 1396.136 kb on + strand, within BWI76_RS06650 at 1396.136 kb on + strand, within BWI76_RS06650 at 1396.136 kb on + strand, within BWI76_RS06650 at 1396.136 kb on + strand, within BWI76_RS06650 at 1396.136 kb on + strand, within BWI76_RS06650 at 1396.144 kb on - strand, within BWI76_RS06650 at 1396.144 kb on - strand, within BWI76_RS06650 at 1396.144 kb on - strand, within BWI76_RS06650 at 1396.170 kb on + strand, within BWI76_RS06650 at 1396.170 kb on + strand, within BWI76_RS06650 at 1396.178 kb on - strand, within BWI76_RS06650 at 1396.178 kb on - strand, within BWI76_RS06650 at 1396.179 kb on - strand, within BWI76_RS06650 at 1396.194 kb on + strand, within BWI76_RS06650 at 1396.204 kb on + strand, within BWI76_RS06650 at 1396.204 kb on + strand, within BWI76_RS06650 at 1396.293 kb on + strand at 1396.293 kb on + strand at 1396.301 kb on - strand, within BWI76_RS06655 at 1396.301 kb on - strand, within BWI76_RS06655 at 1396.301 kb on - strand, within BWI76_RS06655 at 1396.308 kb on + strand, within BWI76_RS06655 at 1396.316 kb on - strand, within BWI76_RS06655 at 1396.316 kb on - strand, within BWI76_RS06655 at 1396.318 kb on + strand, within BWI76_RS06655 at 1396.318 kb on + strand, within BWI76_RS06655 at 1396.318 kb on + strand, within BWI76_RS06655 at 1396.318 kb on + strand, within BWI76_RS06655 at 1396.318 kb on + strand, within BWI76_RS06655 at 1396.318 kb on + strand, within BWI76_RS06655 at 1396.318 kb on + strand, within BWI76_RS06655 at 1396.318 kb on + strand, within BWI76_RS06655 at 1396.318 kb on + strand, within BWI76_RS06655 at 1396.318 kb on + strand, within BWI76_RS06655 at 1396.318 kb on + strand, within BWI76_RS06655 at 1396.326 kb on - strand, within BWI76_RS06655 at 1396.326 kb on - strand at 1396.326 kb on - strand, within BWI76_RS06655 at 1396.326 kb on - strand, within BWI76_RS06655 at 1396.326 kb on - strand, within BWI76_RS06655 at 1396.326 kb on - strand, within BWI76_RS06655 at 1396.326 kb on - strand at 1396.326 kb on - strand at 1396.326 kb on - strand, within BWI76_RS06655 at 1396.327 kb on + strand, within BWI76_RS06655 at 1396.329 kb on + strand, within BWI76_RS06655 at 1396.329 kb on + strand, within BWI76_RS06655 at 1396.332 kb on + strand, within BWI76_RS06655 at 1396.335 kb on - strand, within BWI76_RS06655 at 1396.337 kb on - strand, within BWI76_RS06655 at 1396.337 kb on - strand at 1396.350 kb on + strand, within BWI76_RS06655 at 1396.352 kb on + strand, within BWI76_RS06655 at 1396.352 kb on - strand, within BWI76_RS06655 at 1396.353 kb on + strand, within BWI76_RS06655 at 1396.357 kb on + strand, within BWI76_RS06655 at 1396.360 kb on - strand, within BWI76_RS06655
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB15 MOI 0.1 remove 1,393,992 + +0.1 1,394,151 + BWI76_RS06630 0.23 -0.0 1,394,325 + BWI76_RS06630 0.57 -1.0 1,394,387 + BWI76_RS06630 0.70 -0.8 1,394,439 - BWI76_RS06630 0.80 -0.6 1,394,531 - -0.8 1,394,627 + BWI76_RS06635 0.15 +0.2 1,394,735 + BWI76_RS06635 0.50 -1.2 1,394,744 - BWI76_RS06635 0.53 +0.6 1,395,082 - BWI76_RS06640 0.31 -0.5 1,395,101 + BWI76_RS06640 0.36 -0.2 1,395,192 + BWI76_RS06640 0.58 -1.9 1,395,192 + BWI76_RS06640 0.58 -0.9 1,395,197 + BWI76_RS06640 0.59 -0.8 1,395,197 + BWI76_RS06640 0.59 -0.1 1,395,210 - BWI76_RS06640 0.62 -1.2 1,395,224 - BWI76_RS06640 0.66 -1.2 1,395,328 + +4.1 1,395,336 - +0.3 1,395,718 + -0.2 1,395,732 + -0.7 1,395,758 + -1.2 1,395,766 - +0.7 1,395,766 - -0.2 1,395,904 - +0.9 1,395,938 + -0.5 1,396,022 + +1.0 1,396,022 + +2.6 1,396,022 + -1.0 1,396,022 + -0.5 1,396,022 + +0.3 1,396,023 + -1.1 1,396,027 + +0.6 1,396,030 - -0.2 1,396,030 - -1.2 1,396,030 - -2.1 1,396,032 + -0.8 1,396,032 + +1.2 1,396,035 - -0.8 1,396,037 + -0.4 1,396,037 + +0.2 1,396,040 - +1.4 1,396,124 + BWI76_RS06650 0.38 -0.5 1,396,124 - BWI76_RS06650 0.38 -0.5 1,396,130 + BWI76_RS06650 0.41 -0.7 1,396,135 + BWI76_RS06650 0.43 +0.1 1,396,135 + BWI76_RS06650 0.43 +0.5 1,396,135 + BWI76_RS06650 0.43 -0.3 1,396,135 + BWI76_RS06650 0.43 +0.6 1,396,135 + BWI76_RS06650 0.43 -0.2 1,396,135 + BWI76_RS06650 0.43 +0.8 1,396,135 + BWI76_RS06650 0.43 +0.8 1,396,136 + BWI76_RS06650 0.43 +0.8 1,396,136 + BWI76_RS06650 0.43 -1.3 1,396,136 + BWI76_RS06650 0.43 +0.1 1,396,136 + BWI76_RS06650 0.43 -0.8 1,396,136 + BWI76_RS06650 0.43 -0.6 1,396,136 + BWI76_RS06650 0.43 -0.8 1,396,136 + BWI76_RS06650 0.43 +2.2 1,396,136 + BWI76_RS06650 0.43 -0.0 1,396,136 + -1.2 1,396,136 + BWI76_RS06650 0.43 -1.0 1,396,136 + BWI76_RS06650 0.43 +0.7 1,396,136 + BWI76_RS06650 0.43 -0.2 1,396,136 + BWI76_RS06650 0.43 -1.8 1,396,136 + -1.0 1,396,136 + BWI76_RS06650 0.43 +0.1 1,396,136 + BWI76_RS06650 0.43 -1.0 1,396,136 + BWI76_RS06650 0.43 +0.0 1,396,136 + BWI76_RS06650 0.43 -3.1 1,396,136 + BWI76_RS06650 0.43 -0.5 1,396,144 - BWI76_RS06650 0.46 +0.2 1,396,144 - BWI76_RS06650 0.46 -0.0 1,396,144 - BWI76_RS06650 0.46 -1.2 1,396,170 + BWI76_RS06650 0.56 -1.9 1,396,170 + BWI76_RS06650 0.56 -0.9 1,396,178 - BWI76_RS06650 0.59 -1.8 1,396,178 - BWI76_RS06650 0.59 -0.1 1,396,179 - BWI76_RS06650 0.60 -0.9 1,396,194 + BWI76_RS06650 0.66 +0.3 1,396,204 + BWI76_RS06650 0.69 -2.2 1,396,204 + BWI76_RS06650 0.69 -3.1 1,396,293 + -0.4 1,396,293 + -1.0 1,396,301 - BWI76_RS06655 0.10 +1.1 1,396,301 - BWI76_RS06655 0.10 +0.4 1,396,301 - BWI76_RS06655 0.10 +2.8 1,396,308 + BWI76_RS06655 0.13 -0.7 1,396,316 - BWI76_RS06655 0.17 -2.3 1,396,316 - BWI76_RS06655 0.17 +1.8 1,396,318 + BWI76_RS06655 0.18 -1.7 1,396,318 + BWI76_RS06655 0.18 -0.1 1,396,318 + BWI76_RS06655 0.18 -0.4 1,396,318 + BWI76_RS06655 0.18 -0.1 1,396,318 + BWI76_RS06655 0.18 -1.0 1,396,318 + BWI76_RS06655 0.18 -1.0 1,396,318 + BWI76_RS06655 0.18 +1.8 1,396,318 + BWI76_RS06655 0.18 -0.3 1,396,318 + BWI76_RS06655 0.18 -1.1 1,396,318 + BWI76_RS06655 0.18 -1.3 1,396,318 + BWI76_RS06655 0.18 +0.0 1,396,326 - BWI76_RS06655 0.22 +0.2 1,396,326 - +2.1 1,396,326 - BWI76_RS06655 0.22 +0.1 1,396,326 - BWI76_RS06655 0.22 +2.2 1,396,326 - BWI76_RS06655 0.22 -0.8 1,396,326 - BWI76_RS06655 0.22 +0.5 1,396,326 - -1.0 1,396,326 - -0.5 1,396,326 - BWI76_RS06655 0.22 +1.8 1,396,327 + BWI76_RS06655 0.22 +3.9 1,396,329 + BWI76_RS06655 0.23 +4.0 1,396,329 + BWI76_RS06655 0.23 -0.8 1,396,332 + BWI76_RS06655 0.25 +1.0 1,396,335 - BWI76_RS06655 0.26 -0.7 1,396,337 - BWI76_RS06655 0.27 -2.3 1,396,337 - -0.5 1,396,350 + BWI76_RS06655 0.33 +3.9 1,396,352 + BWI76_RS06655 0.34 +0.8 1,396,352 - BWI76_RS06655 0.34 +0.5 1,396,353 + BWI76_RS06655 0.34 +0.0 1,396,357 + BWI76_RS06655 0.36 +2.8 1,396,360 - BWI76_RS06655 0.38 -1.8
Or see this region's nucleotide sequence