Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS18280

Experiment: KLEB15 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KLEB15 MOI 1
3,798,562	+		BWI76_RS18275	0.41	+0.1
3,798,570	-		BWI76_RS18275	0.42	+0.9
3,798,701	+		BWI76_RS18275	0.51	-0.4
3,798,787	-		BWI76_RS18275	0.57	+0.3
3,799,023	-		BWI76_RS18275	0.73	-0.5
3,799,181	-		BWI76_RS18275	0.84	-1.3
3,799,184	+		BWI76_RS18275	0.85	+0.2
3,799,184	+		BWI76_RS18275	0.85	-0.9
3,799,229	+		BWI76_RS18275	0.88	+0.3
3,799,259	+				-2.7
3,799,351	+				-1.2
3,799,369	+				+0.6
3,799,411	-				+0.5
3,799,466	-				+0.3
3,799,548	-		BWI76_RS18280	0.15	-0.1
3,799,635	+		BWI76_RS18280	0.29	-1.6
3,799,637	+		BWI76_RS18280	0.29	-0.7
3,799,730	+		BWI76_RS18280	0.44	-1.5
3,799,745	-		BWI76_RS18280	0.46	-0.4
3,799,771	+		BWI76_RS18280	0.50	-0.7
3,799,941	+		BWI76_RS18280	0.77	-2.1
3,799,949	-		BWI76_RS18280	0.78	-0.1
3,799,961	-		BWI76_RS18280	0.80	-0.9
3,800,096	+				+1.0
3,800,098	+				+1.7
3,800,098	+				-1.3
3,800,098	+				-0.3
3,800,098	+				+1.3
3,800,106	-				-0.1
3,800,106	-				-0.7
3,800,106	-				-1.1
3,800,106	-				-0.3
3,800,106	-				+0.6
3,800,106	-				+0.1
3,800,106	-				+4.6
3,800,144	-				-0.4
3,800,234	-				+1.0
3,800,254	-				-0.2
3,800,257	-				-0.3
3,800,257	-				+0.5
3,800,266	+				-0.3
3,800,266	+				-0.3
3,800,266	+				-0.6
3,800,267	-				-0.4
3,800,271	+				+0.1
3,800,272	-				-0.2
3,800,274	-				-0.7
3,800,275	+				+0.1
3,800,275	+				-0.1
3,800,287	-				+0.2
3,800,306	-				+0.1
3,800,306	-				-0.2
3,800,312	+				-0.7
3,800,466	-				+0.5
3,800,481	-				-0.0
3,800,547	+				-0.4
3,800,547	+				-1.8
3,800,547	+				-0.2
3,800,555	-				+0.7
3,800,593	+		BWI76_RS18285	0.17	+0.6
3,800,601	-		BWI76_RS18285	0.18	-1.6
3,800,612	+		BWI76_RS18285	0.21	-1.1
3,800,656	+		BWI76_RS18285	0.30	+0.7
3,800,660	-		BWI76_RS18285	0.30	+0.1
3,800,663	+		BWI76_RS18285	0.31	+0.7
3,800,663	+		BWI76_RS18285	0.31	+0.0
3,800,663	+		BWI76_RS18285	0.31	-1.3
3,800,663	+		BWI76_RS18285	0.31	-0.4
3,800,663	+		BWI76_RS18285	0.31	-0.5
3,800,663	+		BWI76_RS18285	0.31	-0.9
3,800,663	+		BWI76_RS18285	0.31	+0.1
3,800,663	+		BWI76_RS18285	0.31	-1.8
3,800,663	+		BWI76_RS18285	0.31	-0.1
3,800,671	-		BWI76_RS18285	0.33	-0.4
3,800,671	-		BWI76_RS18285	0.33	+0.3
3,800,699	+		BWI76_RS18285	0.38	+0.3
3,800,699	+		BWI76_RS18285	0.38	+0.5
3,800,699	+		BWI76_RS18285	0.38	+0.5
3,800,707	-		BWI76_RS18285	0.40	-2.9
3,800,722	+		BWI76_RS18285	0.43	+0.3
3,800,743	+		BWI76_RS18285	0.47	-0.7
3,800,743	+		BWI76_RS18285	0.47	-0.1
3,800,751	-		BWI76_RS18285	0.49	-0.8
3,800,766	+		BWI76_RS18285	0.52	-0.7
3,800,766	+		BWI76_RS18285	0.52	-1.3
3,800,766	+		BWI76_RS18285	0.52	-1.0
3,800,791	+		BWI76_RS18285	0.57	+1.8
3,800,815	+		BWI76_RS18285	0.61	+0.8
3,800,839	+		BWI76_RS18285	0.66	-0.2
3,800,839	+		BWI76_RS18285	0.66	-0.9
3,800,871	+		BWI76_RS18285	0.73	+0.3
3,800,871	+		BWI76_RS18285	0.73	-0.8
3,800,871	+		BWI76_RS18285	0.73	-0.6
3,800,879	+		BWI76_RS18285	0.74	+0.1
3,800,879	+		BWI76_RS18285	0.74	-0.6
3,800,879	+		BWI76_RS18285	0.74	+1.6
3,800,879	+		BWI76_RS18285	0.74	-0.7
3,800,879	+		BWI76_RS18285	0.74	+0.2
3,800,879	+		BWI76_RS18285	0.74	-1.0
3,800,879	+		BWI76_RS18285	0.74	-0.3
3,800,879	-		BWI76_RS18285	0.74	+0.5
3,800,879	-		BWI76_RS18285	0.74	-0.9
3,800,879	-		BWI76_RS18285	0.74	-0.3
3,800,881	+		BWI76_RS18285	0.75	-0.6
3,800,887	-		BWI76_RS18285	0.76	-1.4
3,800,887	-		BWI76_RS18285	0.76	-1.8
3,800,887	-		BWI76_RS18285	0.76	+1.7
3,800,889	-		BWI76_RS18285	0.76	+1.9
3,800,896	+		BWI76_RS18285	0.78	-0.8
3,800,907	+		BWI76_RS18285	0.80	-1.9
3,800,915	-		BWI76_RS18285	0.82	+1.3
3,800,926	+		BWI76_RS18285	0.84	-0.4
3,800,939	-				-1.3
3,800,990	-				+0.1
3,801,031	-				-0.9
3,801,031	-				-0.5
3,801,031	-				+0.7
3,801,031	-				-0.0
3,801,087	-		BWI76_RS18290	0.18	-1.7
3,801,087	-		BWI76_RS18290	0.18	+0.0
3,801,087	-		BWI76_RS18290	0.18	+1.6