Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS13395
Experiment: KLEB15 MOI 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | KLEB15 MOI 1 |
---|---|---|---|---|---|
remove | |||||
2,791,609 | + | +0.4 | |||
2,791,672 | + | +0.6 | |||
2,791,692 | + | BWI76_RS13390 | 0.10 | +0.9 | |
2,791,692 | + | BWI76_RS13390 | 0.10 | +0.5 | |
2,791,700 | - | BWI76_RS13390 | 0.11 | +0.8 | |
2,791,742 | - | BWI76_RS13390 | 0.15 | -0.3 | |
2,791,948 | - | BWI76_RS13390 | 0.35 | +0.2 | |
2,792,004 | + | BWI76_RS13390 | 0.41 | -0.2 | |
2,792,458 | + | BWI76_RS13390 | 0.86 | -0.5 | |
2,792,540 | + | +0.1 | |||
2,792,548 | - | +0.9 | |||
2,792,611 | + | -2.2 | |||
2,792,726 | - | -0.9 | |||
2,792,938 | - | BWI76_RS13395 | 0.24 | +0.6 | |
2,793,007 | - | BWI76_RS13395 | 0.29 | +3.0 | |
2,793,150 | - | BWI76_RS13395 | 0.39 | -0.4 | |
2,793,289 | + | BWI76_RS13395 | 0.49 | +0.2 | |
2,793,425 | - | BWI76_RS13395 | 0.59 | +2.4 | |
2,793,509 | - | BWI76_RS13395 | 0.65 | +0.6 | |
2,793,623 | - | BWI76_RS13395 | 0.73 | -2.1 | |
2,793,650 | + | BWI76_RS13395 | 0.75 | +1.4 | |
2,794,031 | + | -1.4 | |||
2,794,147 | - | -1.1 | |||
2,794,252 | - | -0.9 | |||
2,794,381 | + | -0.3 | |||
2,794,722 | - | BWI76_RS13400 | 0.28 | -1.4 |
Or see this region's nucleotide sequence