Experiment: KLEB15 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS03525 and BWI76_RS03530 are separated by 206 nucleotides BWI76_RS03530 and BWI76_RS03535 are separated by 138 nucleotides
BWI76_RS03525: BWI76_RS03525 - tryptophanyl-tRNA synthetase, at 731,456 to 732,463
_RS03525
BWI76_RS03530: BWI76_RS03530 - tryptophan permease, at 732,670 to 733,926
_RS03530
BWI76_RS03535: BWI76_RS03535 - Tryptophanase (EC 4.1.99.1) <small>(from data)</small>, at 734,065 to 735,453
_RS03535
Position (kb) 732
733
734 Strain fitness (log2 ratio) -2
-1
0
1
2 at 731.709 kb on + strand, within BWI76_RS03525 at 731.745 kb on + strand, within BWI76_RS03525 at 731.920 kb on - strand, within BWI76_RS03525 at 731.929 kb on + strand, within BWI76_RS03525 at 732.106 kb on - strand, within BWI76_RS03525 at 732.437 kb on + strand at 732.532 kb on + strand at 732.532 kb on + strand at 732.579 kb on + strand at 732.690 kb on + strand at 732.690 kb on + strand at 732.698 kb on - strand at 732.798 kb on - strand, within BWI76_RS03530 at 732.822 kb on - strand, within BWI76_RS03530 at 732.839 kb on - strand, within BWI76_RS03530 at 732.901 kb on - strand, within BWI76_RS03530 at 732.949 kb on - strand, within BWI76_RS03530 at 733.002 kb on + strand, within BWI76_RS03530 at 733.067 kb on - strand, within BWI76_RS03530 at 733.087 kb on - strand, within BWI76_RS03530 at 733.099 kb on + strand, within BWI76_RS03530 at 733.208 kb on + strand, within BWI76_RS03530 at 733.339 kb on + strand, within BWI76_RS03530 at 733.339 kb on + strand, within BWI76_RS03530 at 733.359 kb on + strand, within BWI76_RS03530 at 733.404 kb on - strand, within BWI76_RS03530 at 733.444 kb on + strand, within BWI76_RS03530 at 733.491 kb on + strand, within BWI76_RS03530 at 733.491 kb on + strand, within BWI76_RS03530 at 733.499 kb on - strand, within BWI76_RS03530 at 733.516 kb on + strand, within BWI76_RS03530 at 733.524 kb on - strand, within BWI76_RS03530 at 733.534 kb on + strand, within BWI76_RS03530 at 733.538 kb on + strand, within BWI76_RS03530 at 733.542 kb on - strand, within BWI76_RS03530 at 733.575 kb on + strand, within BWI76_RS03530 at 733.583 kb on - strand, within BWI76_RS03530 at 733.614 kb on - strand, within BWI76_RS03530 at 733.615 kb on + strand, within BWI76_RS03530 at 733.619 kb on - strand, within BWI76_RS03530 at 733.675 kb on - strand, within BWI76_RS03530 at 733.686 kb on + strand, within BWI76_RS03530 at 733.694 kb on - strand, within BWI76_RS03530 at 733.694 kb on - strand, within BWI76_RS03530 at 733.731 kb on + strand, within BWI76_RS03530 at 733.732 kb on + strand, within BWI76_RS03530 at 733.732 kb on + strand, within BWI76_RS03530 at 733.739 kb on - strand, within BWI76_RS03530 at 733.742 kb on + strand, within BWI76_RS03530 at 733.751 kb on + strand, within BWI76_RS03530 at 733.752 kb on - strand, within BWI76_RS03530 at 733.763 kb on + strand, within BWI76_RS03530 at 733.769 kb on - strand, within BWI76_RS03530 at 733.772 kb on + strand, within BWI76_RS03530 at 733.774 kb on + strand, within BWI76_RS03530 at 733.884 kb on + strand at 733.886 kb on - strand at 733.892 kb on - strand at 733.892 kb on - strand at 733.922 kb on + strand at 733.922 kb on + strand at 733.922 kb on + strand at 733.923 kb on + strand at 733.930 kb on - strand at 733.930 kb on - strand at 733.952 kb on - strand at 733.954 kb on - strand at 733.955 kb on - strand at 733.977 kb on + strand at 733.979 kb on - strand at 733.992 kb on + strand at 733.992 kb on + strand at 734.000 kb on - strand at 734.000 kb on - strand at 734.000 kb on - strand at 734.006 kb on + strand at 734.013 kb on - strand at 734.058 kb on - strand at 734.083 kb on - strand at 734.084 kb on - strand at 734.098 kb on + strand at 734.098 kb on + strand at 734.098 kb on + strand at 734.098 kb on + strand at 734.098 kb on + strand at 734.098 kb on + strand at 734.098 kb on + strand at 734.098 kb on + strand at 734.106 kb on - strand at 734.106 kb on - strand at 734.106 kb on - strand at 734.106 kb on - strand at 734.111 kb on - strand at 734.111 kb on - strand at 734.113 kb on - strand at 734.113 kb on - strand at 734.120 kb on - strand at 734.120 kb on - strand at 734.127 kb on - strand at 734.132 kb on + strand at 734.140 kb on - strand at 734.140 kb on - strand at 734.154 kb on + strand at 734.154 kb on + strand at 734.162 kb on - strand at 734.162 kb on - strand at 734.162 kb on - strand at 734.162 kb on - strand at 734.200 kb on + strand at 734.230 kb on + strand, within BWI76_RS03535 at 734.361 kb on + strand, within BWI76_RS03535 at 734.449 kb on + strand, within BWI76_RS03535 at 734.503 kb on - strand, within BWI76_RS03535 at 734.557 kb on - strand, within BWI76_RS03535 at 734.609 kb on + strand, within BWI76_RS03535 at 734.639 kb on - strand, within BWI76_RS03535 at 734.644 kb on - strand, within BWI76_RS03535 at 734.686 kb on + strand, within BWI76_RS03535 at 734.691 kb on + strand, within BWI76_RS03535 at 734.691 kb on + strand, within BWI76_RS03535 at 734.691 kb on + strand, within BWI76_RS03535 at 734.691 kb on + strand, within BWI76_RS03535 at 734.691 kb on + strand, within BWI76_RS03535 at 734.691 kb on + strand, within BWI76_RS03535 at 734.694 kb on - strand, within BWI76_RS03535 at 734.694 kb on - strand, within BWI76_RS03535 at 734.699 kb on - strand, within BWI76_RS03535 at 734.699 kb on - strand, within BWI76_RS03535 at 734.699 kb on - strand, within BWI76_RS03535 at 734.706 kb on + strand, within BWI76_RS03535 at 734.744 kb on + strand, within BWI76_RS03535 at 734.752 kb on - strand, within BWI76_RS03535 at 734.752 kb on - strand, within BWI76_RS03535 at 734.763 kb on + strand, within BWI76_RS03535 at 734.836 kb on + strand, within BWI76_RS03535 at 734.842 kb on - strand, within BWI76_RS03535 at 734.844 kb on - strand, within BWI76_RS03535 at 734.885 kb on + strand, within BWI76_RS03535 at 734.887 kb on + strand, within BWI76_RS03535 at 734.893 kb on + strand, within BWI76_RS03535
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB15 MOI 1 remove 731,709 + BWI76_RS03525 0.25 +0.6 731,745 + BWI76_RS03525 0.29 +0.1 731,920 - BWI76_RS03525 0.46 -0.1 731,929 + BWI76_RS03525 0.47 -0.4 732,106 - BWI76_RS03525 0.64 -0.5 732,437 + +0.3 732,532 + +0.1 732,532 + +0.2 732,579 + +0.5 732,690 + +1.8 732,690 + +0.5 732,698 - +0.5 732,798 - BWI76_RS03530 0.10 -0.6 732,822 - BWI76_RS03530 0.12 +0.8 732,839 - BWI76_RS03530 0.13 -1.1 732,901 - BWI76_RS03530 0.18 -0.6 732,949 - BWI76_RS03530 0.22 +0.3 733,002 + BWI76_RS03530 0.26 -1.0 733,067 - BWI76_RS03530 0.32 +0.2 733,087 - BWI76_RS03530 0.33 -0.9 733,099 + BWI76_RS03530 0.34 +0.3 733,208 + BWI76_RS03530 0.43 +0.2 733,339 + BWI76_RS03530 0.53 +0.2 733,339 + BWI76_RS03530 0.53 +0.4 733,359 + BWI76_RS03530 0.55 -0.1 733,404 - BWI76_RS03530 0.58 +1.0 733,444 + BWI76_RS03530 0.62 +0.7 733,491 + BWI76_RS03530 0.65 -1.4 733,491 + BWI76_RS03530 0.65 +1.0 733,499 - BWI76_RS03530 0.66 +1.6 733,516 + BWI76_RS03530 0.67 -0.2 733,524 - BWI76_RS03530 0.68 +0.2 733,534 + BWI76_RS03530 0.69 -0.5 733,538 + BWI76_RS03530 0.69 +0.1 733,542 - BWI76_RS03530 0.69 +1.9 733,575 + BWI76_RS03530 0.72 +0.1 733,583 - BWI76_RS03530 0.73 -0.3 733,614 - BWI76_RS03530 0.75 -0.0 733,615 + BWI76_RS03530 0.75 +0.3 733,619 - BWI76_RS03530 0.75 +1.0 733,675 - BWI76_RS03530 0.80 -0.5 733,686 + BWI76_RS03530 0.81 +1.5 733,694 - BWI76_RS03530 0.81 +0.3 733,694 - BWI76_RS03530 0.81 +1.1 733,731 + BWI76_RS03530 0.84 +1.3 733,732 + BWI76_RS03530 0.84 +0.3 733,732 + BWI76_RS03530 0.84 +0.0 733,739 - BWI76_RS03530 0.85 +0.8 733,742 + BWI76_RS03530 0.85 +0.8 733,751 + BWI76_RS03530 0.86 -0.7 733,752 - BWI76_RS03530 0.86 +0.9 733,763 + BWI76_RS03530 0.87 +0.4 733,769 - BWI76_RS03530 0.87 +2.0 733,772 + BWI76_RS03530 0.88 +0.1 733,774 + BWI76_RS03530 0.88 -0.7 733,884 + +0.3 733,886 - -0.4 733,892 - -0.5 733,892 - +0.4 733,922 + -0.7 733,922 + +0.5 733,922 + +0.9 733,923 + -0.5 733,930 - -1.2 733,930 - -0.2 733,952 - -0.2 733,954 - +0.2 733,955 - +0.6 733,977 + -0.9 733,979 - +0.3 733,992 + +0.5 733,992 + -0.5 734,000 - +0.3 734,000 - +0.9 734,000 - -0.0 734,006 + +1.3 734,013 - -0.2 734,058 - +0.9 734,083 - -0.1 734,084 - -0.1 734,098 + +0.0 734,098 + -0.4 734,098 + -0.9 734,098 + +0.2 734,098 + +2.5 734,098 + -1.7 734,098 + -0.1 734,098 + +0.2 734,106 - -0.9 734,106 - -2.0 734,106 - -0.0 734,106 - +0.2 734,111 - -0.2 734,111 - +0.8 734,113 - +0.3 734,113 - +0.8 734,120 - +0.9 734,120 - -0.1 734,127 - -0.1 734,132 + +0.2 734,140 - +0.1 734,140 - +0.7 734,154 + -0.3 734,154 + +0.1 734,162 - -0.2 734,162 - +0.1 734,162 - -1.6 734,162 - -0.4 734,200 + +0.6 734,230 + BWI76_RS03535 0.12 -0.7 734,361 + BWI76_RS03535 0.21 -1.6 734,449 + BWI76_RS03535 0.28 -0.6 734,503 - BWI76_RS03535 0.32 +0.4 734,557 - BWI76_RS03535 0.35 +1.1 734,609 + BWI76_RS03535 0.39 +0.0 734,639 - BWI76_RS03535 0.41 -0.1 734,644 - BWI76_RS03535 0.42 +0.2 734,686 + BWI76_RS03535 0.45 +0.5 734,691 + BWI76_RS03535 0.45 -1.3 734,691 + BWI76_RS03535 0.45 +0.3 734,691 + BWI76_RS03535 0.45 +1.9 734,691 + BWI76_RS03535 0.45 +0.5 734,691 + BWI76_RS03535 0.45 -0.3 734,691 + BWI76_RS03535 0.45 +0.4 734,694 - BWI76_RS03535 0.45 +0.5 734,694 - BWI76_RS03535 0.45 +0.1 734,699 - BWI76_RS03535 0.46 +0.0 734,699 - BWI76_RS03535 0.46 -0.5 734,699 - BWI76_RS03535 0.46 +2.0 734,706 + BWI76_RS03535 0.46 +0.2 734,744 + BWI76_RS03535 0.49 -0.2 734,752 - BWI76_RS03535 0.49 +0.8 734,752 - BWI76_RS03535 0.49 -0.2 734,763 + BWI76_RS03535 0.50 -0.7 734,836 + BWI76_RS03535 0.56 +0.7 734,842 - BWI76_RS03535 0.56 -0.3 734,844 - BWI76_RS03535 0.56 -1.0 734,885 + BWI76_RS03535 0.59 +0.0 734,887 + BWI76_RS03535 0.59 +0.2 734,893 + BWI76_RS03535 0.60 -0.7
Or see this region's nucleotide sequence