Experiment: KLEB15 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS03355 and BWI76_RS03360 are separated by 51 nucleotides BWI76_RS03360 and BWI76_RS03365 are separated by 311 nucleotides
BWI76_RS03355: BWI76_RS03355 - hypothetical protein, at 691,229 to 692,290
_RS03355
BWI76_RS03360: BWI76_RS03360 - IS3 family transposase, at 692,342 to 693,549
_RS03360
BWI76_RS03365: BWI76_RS03365 - N-6 DNA methylase, at 693,861 to 694,754
_RS03365
Position (kb) 692
693
694 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4 at 691.360 kb on - strand, within BWI76_RS03355 at 691.411 kb on + strand, within BWI76_RS03355 at 691.483 kb on - strand, within BWI76_RS03355 at 691.519 kb on + strand, within BWI76_RS03355 at 691.599 kb on + strand, within BWI76_RS03355 at 691.599 kb on + strand, within BWI76_RS03355 at 691.599 kb on + strand, within BWI76_RS03355 at 691.599 kb on + strand, within BWI76_RS03355 at 691.599 kb on + strand, within BWI76_RS03355 at 691.599 kb on + strand, within BWI76_RS03355 at 691.599 kb on + strand, within BWI76_RS03355 at 691.599 kb on + strand, within BWI76_RS03355 at 691.599 kb on + strand, within BWI76_RS03355 at 691.599 kb on + strand, within BWI76_RS03355 at 691.606 kb on + strand, within BWI76_RS03355 at 691.607 kb on - strand, within BWI76_RS03355 at 691.607 kb on - strand, within BWI76_RS03355 at 691.607 kb on - strand, within BWI76_RS03355 at 691.607 kb on - strand, within BWI76_RS03355 at 691.607 kb on - strand, within BWI76_RS03355 at 691.614 kb on - strand, within BWI76_RS03355 at 691.614 kb on - strand at 691.619 kb on + strand, within BWI76_RS03355 at 691.708 kb on + strand, within BWI76_RS03355 at 691.708 kb on + strand, within BWI76_RS03355 at 691.709 kb on + strand, within BWI76_RS03355 at 691.709 kb on + strand, within BWI76_RS03355 at 691.717 kb on - strand at 691.726 kb on + strand, within BWI76_RS03355 at 691.727 kb on + strand at 691.785 kb on + strand, within BWI76_RS03355 at 691.785 kb on + strand, within BWI76_RS03355 at 691.786 kb on + strand, within BWI76_RS03355 at 691.793 kb on - strand, within BWI76_RS03355 at 691.808 kb on - strand, within BWI76_RS03355 at 691.810 kb on + strand, within BWI76_RS03355 at 691.810 kb on + strand at 691.811 kb on + strand, within BWI76_RS03355 at 691.816 kb on + strand, within BWI76_RS03355 at 691.816 kb on + strand, within BWI76_RS03355 at 691.816 kb on + strand, within BWI76_RS03355 at 691.816 kb on + strand, within BWI76_RS03355 at 691.816 kb on + strand, within BWI76_RS03355 at 691.816 kb on + strand, within BWI76_RS03355 at 691.816 kb on + strand, within BWI76_RS03355 at 691.816 kb on + strand, within BWI76_RS03355 at 691.818 kb on - strand, within BWI76_RS03355 at 691.824 kb on - strand, within BWI76_RS03355 at 691.824 kb on - strand, within BWI76_RS03355 at 691.824 kb on - strand, within BWI76_RS03355 at 691.824 kb on - strand, within BWI76_RS03355 at 691.832 kb on + strand, within BWI76_RS03355 at 691.832 kb on + strand, within BWI76_RS03355 at 691.851 kb on - strand, within BWI76_RS03355 at 691.904 kb on + strand, within BWI76_RS03355 at 691.904 kb on + strand, within BWI76_RS03355 at 691.904 kb on + strand, within BWI76_RS03355 at 691.904 kb on + strand, within BWI76_RS03355 at 691.904 kb on + strand, within BWI76_RS03355 at 691.909 kb on + strand, within BWI76_RS03355 at 691.912 kb on - strand, within BWI76_RS03355 at 691.921 kb on + strand, within BWI76_RS03355 at 691.921 kb on + strand, within BWI76_RS03355 at 691.921 kb on + strand, within BWI76_RS03355 at 691.921 kb on + strand, within BWI76_RS03355 at 691.921 kb on + strand, within BWI76_RS03355 at 691.921 kb on + strand, within BWI76_RS03355 at 691.953 kb on + strand, within BWI76_RS03355 at 691.968 kb on + strand, within BWI76_RS03355 at 691.968 kb on + strand, within BWI76_RS03355 at 691.976 kb on - strand, within BWI76_RS03355 at 691.991 kb on + strand, within BWI76_RS03355 at 691.991 kb on + strand at 691.991 kb on + strand, within BWI76_RS03355 at 691.999 kb on + strand, within BWI76_RS03355 at 692.010 kb on - strand, within BWI76_RS03355 at 692.018 kb on + strand, within BWI76_RS03355 at 692.018 kb on + strand, within BWI76_RS03355 at 692.018 kb on + strand, within BWI76_RS03355 at 692.018 kb on + strand, within BWI76_RS03355 at 692.018 kb on + strand, within BWI76_RS03355 at 692.018 kb on + strand, within BWI76_RS03355 at 692.018 kb on + strand, within BWI76_RS03355 at 692.018 kb on + strand, within BWI76_RS03355 at 692.018 kb on + strand, within BWI76_RS03355 at 692.018 kb on + strand, within BWI76_RS03355 at 692.018 kb on + strand, within BWI76_RS03355 at 692.018 kb on + strand, within BWI76_RS03355 at 692.018 kb on + strand, within BWI76_RS03355 at 692.018 kb on + strand, within BWI76_RS03355 at 692.026 kb on - strand, within BWI76_RS03355 at 692.026 kb on - strand, within BWI76_RS03355 at 692.026 kb on - strand, within BWI76_RS03355 at 692.026 kb on - strand, within BWI76_RS03355 at 692.026 kb on - strand, within BWI76_RS03355 at 692.045 kb on - strand, within BWI76_RS03355 at 692.077 kb on + strand, within BWI76_RS03355 at 692.212 kb on + strand at 692.212 kb on + strand at 692.218 kb on + strand at 692.225 kb on + strand at 692.225 kb on + strand at 692.234 kb on + strand at 692.237 kb on + strand at 692.237 kb on + strand at 692.245 kb on - strand at 692.245 kb on - strand at 692.248 kb on - strand at 692.264 kb on - strand at 692.266 kb on - strand at 692.268 kb on + strand at 692.269 kb on + strand at 692.269 kb on + strand at 692.269 kb on - strand at 692.279 kb on - strand at 692.322 kb on - strand at 692.329 kb on + strand at 692.329 kb on - strand at 692.331 kb on + strand at 692.353 kb on - strand at 692.384 kb on + strand at 692.392 kb on + strand at 692.392 kb on - strand at 692.398 kb on - strand at 692.400 kb on + strand at 692.447 kb on + strand at 692.455 kb on - strand at 692.460 kb on - strand at 692.516 kb on + strand, within BWI76_RS03360 at 692.524 kb on - strand, within BWI76_RS03360 at 692.546 kb on + strand, within BWI76_RS03360 at 692.556 kb on + strand, within BWI76_RS03360 at 692.556 kb on + strand, within BWI76_RS03360 at 692.564 kb on - strand, within BWI76_RS03360 at 692.567 kb on - strand, within BWI76_RS03360 at 692.591 kb on + strand, within BWI76_RS03360 at 692.618 kb on - strand, within BWI76_RS03360 at 692.618 kb on - strand, within BWI76_RS03360 at 692.707 kb on - strand, within BWI76_RS03360 at 692.733 kb on - strand, within BWI76_RS03360 at 692.744 kb on + strand, within BWI76_RS03360 at 692.752 kb on - strand, within BWI76_RS03360 at 692.753 kb on - strand, within BWI76_RS03360 at 692.776 kb on - strand, within BWI76_RS03360 at 692.778 kb on + strand, within BWI76_RS03360 at 692.832 kb on - strand, within BWI76_RS03360 at 692.855 kb on - strand, within BWI76_RS03360 at 693.026 kb on + strand, within BWI76_RS03360 at 693.098 kb on + strand, within BWI76_RS03360 at 693.165 kb on - strand at 693.167 kb on - strand, within BWI76_RS03360 at 693.173 kb on + strand, within BWI76_RS03360 at 693.191 kb on + strand, within BWI76_RS03360 at 693.249 kb on - strand, within BWI76_RS03360 at 693.323 kb on + strand, within BWI76_RS03360 at 693.452 kb on - strand at 693.473 kb on - strand at 693.476 kb on - strand at 693.488 kb on - strand at 693.506 kb on + strand at 693.514 kb on - strand at 693.514 kb on - strand at 693.522 kb on + strand at 693.522 kb on + strand at 693.566 kb on + strand at 693.568 kb on - strand at 693.579 kb on + strand at 693.615 kb on + strand at 693.623 kb on - strand at 693.680 kb on - strand at 693.682 kb on + strand at 693.690 kb on - strand at 693.706 kb on + strand at 693.706 kb on + strand at 693.706 kb on + strand at 693.714 kb on - strand at 693.714 kb on - strand at 693.714 kb on - strand at 693.804 kb on + strand at 693.834 kb on + strand at 693.887 kb on - strand at 693.888 kb on - strand at 693.913 kb on - strand at 693.934 kb on - strand at 693.988 kb on + strand, within BWI76_RS03365 at 693.996 kb on - strand, within BWI76_RS03365 at 694.002 kb on + strand, within BWI76_RS03365 at 694.002 kb on + strand, within BWI76_RS03365 at 694.002 kb on + strand, within BWI76_RS03365 at 694.010 kb on - strand, within BWI76_RS03365 at 694.010 kb on - strand, within BWI76_RS03365 at 694.021 kb on + strand, within BWI76_RS03365 at 694.029 kb on - strand, within BWI76_RS03365 at 694.061 kb on + strand, within BWI76_RS03365 at 694.061 kb on + strand, within BWI76_RS03365 at 694.069 kb on - strand, within BWI76_RS03365 at 694.109 kb on + strand, within BWI76_RS03365 at 694.122 kb on - strand, within BWI76_RS03365 at 694.122 kb on - strand, within BWI76_RS03365 at 694.126 kb on + strand, within BWI76_RS03365 at 694.126 kb on + strand, within BWI76_RS03365 at 694.134 kb on - strand, within BWI76_RS03365 at 694.134 kb on - strand, within BWI76_RS03365 at 694.134 kb on - strand, within BWI76_RS03365 at 694.134 kb on - strand, within BWI76_RS03365 at 694.134 kb on - strand, within BWI76_RS03365 at 694.137 kb on - strand, within BWI76_RS03365 at 694.138 kb on + strand, within BWI76_RS03365 at 694.146 kb on - strand, within BWI76_RS03365 at 694.156 kb on + strand, within BWI76_RS03365 at 694.164 kb on - strand, within BWI76_RS03365 at 694.164 kb on - strand, within BWI76_RS03365 at 694.164 kb on - strand, within BWI76_RS03365 at 694.229 kb on + strand, within BWI76_RS03365 at 694.266 kb on + strand, within BWI76_RS03365 at 694.292 kb on + strand, within BWI76_RS03365 at 694.294 kb on + strand, within BWI76_RS03365 at 694.317 kb on - strand, within BWI76_RS03365 at 694.321 kb on + strand, within BWI76_RS03365 at 694.338 kb on - strand at 694.387 kb on + strand, within BWI76_RS03365 at 694.389 kb on + strand, within BWI76_RS03365 at 694.389 kb on + strand, within BWI76_RS03365 at 694.397 kb on - strand, within BWI76_RS03365 at 694.397 kb on - strand, within BWI76_RS03365 at 694.397 kb on - strand, within BWI76_RS03365 at 694.410 kb on - strand, within BWI76_RS03365 at 694.474 kb on + strand, within BWI76_RS03365 at 694.482 kb on - strand, within BWI76_RS03365 at 694.495 kb on - strand at 694.509 kb on + strand, within BWI76_RS03365 at 694.509 kb on + strand, within BWI76_RS03365 at 694.515 kb on + strand, within BWI76_RS03365
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB15 MOI 1 remove 691,360 - BWI76_RS03355 0.12 -1.3 691,411 + BWI76_RS03355 0.17 +1.1 691,483 - BWI76_RS03355 0.24 -0.8 691,519 + BWI76_RS03355 0.27 +0.8 691,599 + BWI76_RS03355 0.35 +1.7 691,599 + BWI76_RS03355 0.35 +2.9 691,599 + BWI76_RS03355 0.35 -0.7 691,599 + BWI76_RS03355 0.35 +1.3 691,599 + BWI76_RS03355 0.35 -0.6 691,599 + BWI76_RS03355 0.35 -1.1 691,599 + BWI76_RS03355 0.35 -0.7 691,599 + BWI76_RS03355 0.35 -0.4 691,599 + BWI76_RS03355 0.35 +1.0 691,599 + BWI76_RS03355 0.35 -0.9 691,606 + BWI76_RS03355 0.35 -0.5 691,607 - BWI76_RS03355 0.36 -1.5 691,607 - BWI76_RS03355 0.36 +0.1 691,607 - BWI76_RS03355 0.36 +2.3 691,607 - BWI76_RS03355 0.36 -0.1 691,607 - BWI76_RS03355 0.36 +2.3 691,614 - BWI76_RS03355 0.36 +0.9 691,614 - -2.2 691,619 + BWI76_RS03355 0.37 +0.5 691,708 + BWI76_RS03355 0.45 -1.7 691,708 + BWI76_RS03355 0.45 -2.2 691,709 + BWI76_RS03355 0.45 -0.8 691,709 + BWI76_RS03355 0.45 -0.5 691,717 - +2.9 691,726 + BWI76_RS03355 0.47 -2.5 691,727 + +2.3 691,785 + BWI76_RS03355 0.52 -1.1 691,785 + BWI76_RS03355 0.52 +0.3 691,786 + BWI76_RS03355 0.52 -1.8 691,793 - BWI76_RS03355 0.53 -1.8 691,808 - BWI76_RS03355 0.55 -0.5 691,810 + BWI76_RS03355 0.55 -1.3 691,810 + -0.3 691,811 + BWI76_RS03355 0.55 +1.3 691,816 + BWI76_RS03355 0.55 +1.3 691,816 + BWI76_RS03355 0.55 -1.3 691,816 + BWI76_RS03355 0.55 -0.6 691,816 + BWI76_RS03355 0.55 -1.5 691,816 + BWI76_RS03355 0.55 -2.2 691,816 + BWI76_RS03355 0.55 -0.7 691,816 + BWI76_RS03355 0.55 -0.3 691,816 + BWI76_RS03355 0.55 +2.8 691,818 - BWI76_RS03355 0.55 +0.4 691,824 - BWI76_RS03355 0.56 +0.6 691,824 - BWI76_RS03355 0.56 -1.3 691,824 - BWI76_RS03355 0.56 -0.6 691,824 - BWI76_RS03355 0.56 -0.6 691,832 + BWI76_RS03355 0.57 +0.9 691,832 + BWI76_RS03355 0.57 -1.0 691,851 - BWI76_RS03355 0.59 +1.9 691,904 + BWI76_RS03355 0.64 +0.5 691,904 + BWI76_RS03355 0.64 -1.5 691,904 + BWI76_RS03355 0.64 +0.3 691,904 + BWI76_RS03355 0.64 +1.3 691,904 + BWI76_RS03355 0.64 -0.0 691,909 + BWI76_RS03355 0.64 -0.9 691,912 - BWI76_RS03355 0.64 -2.2 691,921 + BWI76_RS03355 0.65 -1.1 691,921 + BWI76_RS03355 0.65 -2.9 691,921 + BWI76_RS03355 0.65 +0.8 691,921 + BWI76_RS03355 0.65 -3.9 691,921 + BWI76_RS03355 0.65 +0.4 691,921 + BWI76_RS03355 0.65 -0.0 691,953 + BWI76_RS03355 0.68 +0.3 691,968 + BWI76_RS03355 0.70 +0.3 691,968 + BWI76_RS03355 0.70 +1.9 691,976 - BWI76_RS03355 0.70 +0.1 691,991 + BWI76_RS03355 0.72 +1.8 691,991 + +0.9 691,991 + BWI76_RS03355 0.72 -0.5 691,999 + BWI76_RS03355 0.73 +0.3 692,010 - BWI76_RS03355 0.74 -0.6 692,018 + BWI76_RS03355 0.74 +1.3 692,018 + BWI76_RS03355 0.74 -2.9 692,018 + BWI76_RS03355 0.74 +1.1 692,018 + BWI76_RS03355 0.74 -0.3 692,018 + BWI76_RS03355 0.74 -0.5 692,018 + BWI76_RS03355 0.74 -3.2 692,018 + BWI76_RS03355 0.74 -1.3 692,018 + BWI76_RS03355 0.74 +0.6 692,018 + BWI76_RS03355 0.74 -1.0 692,018 + BWI76_RS03355 0.74 -1.1 692,018 + BWI76_RS03355 0.74 -0.4 692,018 + BWI76_RS03355 0.74 -0.8 692,018 + BWI76_RS03355 0.74 -0.8 692,018 + BWI76_RS03355 0.74 +0.3 692,026 - BWI76_RS03355 0.75 -0.3 692,026 - BWI76_RS03355 0.75 -1.1 692,026 - BWI76_RS03355 0.75 -1.0 692,026 - BWI76_RS03355 0.75 -0.7 692,026 - BWI76_RS03355 0.75 -2.1 692,045 - BWI76_RS03355 0.77 -0.2 692,077 + BWI76_RS03355 0.80 -2.4 692,212 + -0.7 692,212 + +1.4 692,218 + +0.2 692,225 + +0.5 692,225 + -1.8 692,234 + -0.7 692,237 + +2.2 692,237 + -1.0 692,245 - -1.5 692,245 - -1.2 692,248 - -2.6 692,264 - +1.3 692,266 - -0.7 692,268 + -0.5 692,269 + +0.6 692,269 + -0.7 692,269 - -1.7 692,279 - -0.1 692,322 - -0.3 692,329 + -2.0 692,329 - +0.7 692,331 + +0.2 692,353 - -0.1 692,384 + -0.3 692,392 + +0.1 692,392 - +0.1 692,398 - +0.6 692,400 + -0.6 692,447 + -0.6 692,455 - +0.5 692,460 - -3.7 692,516 + BWI76_RS03360 0.14 -1.0 692,524 - BWI76_RS03360 0.15 -0.6 692,546 + BWI76_RS03360 0.17 -0.2 692,556 + BWI76_RS03360 0.18 -1.3 692,556 + BWI76_RS03360 0.18 -1.0 692,564 - BWI76_RS03360 0.18 -0.3 692,567 - BWI76_RS03360 0.19 -0.8 692,591 + BWI76_RS03360 0.21 -0.7 692,618 - BWI76_RS03360 0.23 -0.3 692,618 - BWI76_RS03360 0.23 -0.5 692,707 - BWI76_RS03360 0.30 -0.3 692,733 - BWI76_RS03360 0.32 -0.3 692,744 + BWI76_RS03360 0.33 -1.0 692,752 - BWI76_RS03360 0.34 -0.8 692,753 - BWI76_RS03360 0.34 -2.2 692,776 - BWI76_RS03360 0.36 -1.3 692,778 + BWI76_RS03360 0.36 +4.3 692,832 - BWI76_RS03360 0.41 -2.0 692,855 - BWI76_RS03360 0.42 +1.3 693,026 + BWI76_RS03360 0.57 -0.6 693,098 + BWI76_RS03360 0.63 +1.3 693,165 - +1.3 693,167 - BWI76_RS03360 0.68 +1.6 693,173 + BWI76_RS03360 0.69 -0.2 693,191 + BWI76_RS03360 0.70 -0.2 693,249 - BWI76_RS03360 0.75 -0.4 693,323 + BWI76_RS03360 0.81 -0.6 693,452 - +3.0 693,473 - +0.2 693,476 - +0.3 693,488 - -0.6 693,506 + +0.3 693,514 - +0.0 693,514 - -0.1 693,522 + -0.3 693,522 + -0.3 693,566 + -0.8 693,568 - -2.2 693,579 + -1.2 693,615 + +0.1 693,623 - -0.6 693,680 - +0.2 693,682 + -1.0 693,690 - -1.8 693,706 + -0.4 693,706 + -0.6 693,706 + -0.2 693,714 - -0.1 693,714 - -0.5 693,714 - -1.3 693,804 + -0.4 693,834 + +1.3 693,887 - -0.4 693,888 - -3.5 693,913 - -0.7 693,934 - +1.6 693,988 + BWI76_RS03365 0.14 -1.0 693,996 - BWI76_RS03365 0.15 -0.4 694,002 + BWI76_RS03365 0.16 -0.6 694,002 + BWI76_RS03365 0.16 +0.0 694,002 + BWI76_RS03365 0.16 +1.0 694,010 - BWI76_RS03365 0.17 -0.1 694,010 - BWI76_RS03365 0.17 -0.5 694,021 + BWI76_RS03365 0.18 +0.5 694,029 - BWI76_RS03365 0.19 -1.4 694,061 + BWI76_RS03365 0.22 -0.3 694,061 + BWI76_RS03365 0.22 -0.8 694,069 - BWI76_RS03365 0.23 -0.5 694,109 + BWI76_RS03365 0.28 -0.3 694,122 - BWI76_RS03365 0.29 +0.9 694,122 - BWI76_RS03365 0.29 -0.6 694,126 + BWI76_RS03365 0.30 -0.6 694,126 + BWI76_RS03365 0.30 -0.5 694,134 - BWI76_RS03365 0.31 +0.3 694,134 - BWI76_RS03365 0.31 +0.2 694,134 - BWI76_RS03365 0.31 -0.6 694,134 - BWI76_RS03365 0.31 -0.5 694,134 - BWI76_RS03365 0.31 +0.5 694,137 - BWI76_RS03365 0.31 -0.1 694,138 + BWI76_RS03365 0.31 -1.0 694,146 - BWI76_RS03365 0.32 -0.2 694,156 + BWI76_RS03365 0.33 -0.5 694,164 - BWI76_RS03365 0.34 -0.5 694,164 - BWI76_RS03365 0.34 +0.7 694,164 - BWI76_RS03365 0.34 +0.7 694,229 + BWI76_RS03365 0.41 -0.9 694,266 + BWI76_RS03365 0.45 -0.0 694,292 + BWI76_RS03365 0.48 -0.8 694,294 + BWI76_RS03365 0.48 +0.1 694,317 - BWI76_RS03365 0.51 +1.6 694,321 + BWI76_RS03365 0.51 -1.3 694,338 - -1.3 694,387 + BWI76_RS03365 0.59 +2.8 694,389 + BWI76_RS03365 0.59 -0.9 694,389 + BWI76_RS03365 0.59 -0.3 694,397 - BWI76_RS03365 0.60 +0.7 694,397 - BWI76_RS03365 0.60 +0.9 694,397 - BWI76_RS03365 0.60 -0.0 694,410 - BWI76_RS03365 0.61 +0.6 694,474 + BWI76_RS03365 0.69 +0.7 694,482 - BWI76_RS03365 0.69 -0.2 694,495 - +2.4 694,509 + BWI76_RS03365 0.72 -0.0 694,509 + BWI76_RS03365 0.72 -0.5 694,515 + BWI76_RS03365 0.73 -0.9
Or see this region's nucleotide sequence