Experiment: KLEB15 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS25000 and BWI76_RS25005 overlap by 8 nucleotides BWI76_RS25005 and BWI76_RS25010 overlap by 1 nucleotides BWI76_RS25010 and BWI76_RS25015 are separated by 17 nucleotides
BWI76_RS25000: BWI76_RS25000 - malonate decarboxylase acyl carrier protein, at 5,206,851 to 5,207,183
_RS25000
BWI76_RS25005: BWI76_RS25005 - biotin-independent malonate decarboxylase subunit beta, at 5,207,176 to 5,208,105
_RS25005
BWI76_RS25010: BWI76_RS25010 - malonyl-S-acyl carrier protein--biotin carboxyltransferase, at 5,208,105 to 5,208,986
_RS25010
BWI76_RS25015: BWI76_RS25015 - hypothetical protein, at 5,209,004 to 5,210,107
_RS25015
Position (kb) 5208
5209 Strain fitness (log2 ratio) -2
-1
0
1 at 5207.131 kb on + strand, within BWI76_RS25000 at 5207.151 kb on - strand at 5207.296 kb on + strand, within BWI76_RS25005 at 5207.301 kb on + strand, within BWI76_RS25005 at 5207.339 kb on + strand, within BWI76_RS25005 at 5207.347 kb on - strand, within BWI76_RS25005 at 5207.549 kb on - strand, within BWI76_RS25005 at 5207.650 kb on - strand, within BWI76_RS25005 at 5208.002 kb on + strand, within BWI76_RS25005 at 5208.195 kb on - strand, within BWI76_RS25010 at 5208.214 kb on + strand, within BWI76_RS25010 at 5208.235 kb on - strand, within BWI76_RS25010 at 5208.242 kb on + strand, within BWI76_RS25010 at 5208.498 kb on - strand, within BWI76_RS25010 at 5208.576 kb on + strand, within BWI76_RS25010 at 5208.651 kb on + strand, within BWI76_RS25010 at 5208.763 kb on - strand, within BWI76_RS25010 at 5208.784 kb on - strand, within BWI76_RS25010 at 5208.868 kb on + strand, within BWI76_RS25010 at 5208.870 kb on + strand, within BWI76_RS25010 at 5208.986 kb on + strand at 5209.168 kb on - strand, within BWI76_RS25015 at 5209.310 kb on - strand, within BWI76_RS25015 at 5209.342 kb on + strand, within BWI76_RS25015 at 5209.479 kb on + strand, within BWI76_RS25015 at 5209.573 kb on + strand, within BWI76_RS25015 at 5209.692 kb on + strand, within BWI76_RS25015 at 5209.694 kb on - strand, within BWI76_RS25015 at 5209.903 kb on + strand, within BWI76_RS25015 at 5209.923 kb on - strand, within BWI76_RS25015
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB15 MOI 1 remove 5,207,131 + BWI76_RS25000 0.84 -2.1 5,207,151 - -0.2 5,207,296 + BWI76_RS25005 0.13 -0.3 5,207,301 + BWI76_RS25005 0.13 +0.6 5,207,339 + BWI76_RS25005 0.18 -0.4 5,207,347 - BWI76_RS25005 0.18 +0.9 5,207,549 - BWI76_RS25005 0.40 +0.1 5,207,650 - BWI76_RS25005 0.51 -0.4 5,208,002 + BWI76_RS25005 0.89 -1.5 5,208,195 - BWI76_RS25010 0.10 +1.0 5,208,214 + BWI76_RS25010 0.12 -1.8 5,208,235 - BWI76_RS25010 0.15 +0.8 5,208,242 + BWI76_RS25010 0.16 -0.2 5,208,498 - BWI76_RS25010 0.45 +0.0 5,208,576 + BWI76_RS25010 0.53 +0.7 5,208,651 + BWI76_RS25010 0.62 +0.5 5,208,763 - BWI76_RS25010 0.75 +0.0 5,208,784 - BWI76_RS25010 0.77 +0.9 5,208,868 + BWI76_RS25010 0.87 -0.4 5,208,870 + BWI76_RS25010 0.87 +1.1 5,208,986 + -0.4 5,209,168 - BWI76_RS25015 0.15 -0.5 5,209,310 - BWI76_RS25015 0.28 +0.2 5,209,342 + BWI76_RS25015 0.31 -0.5 5,209,479 + BWI76_RS25015 0.43 +0.8 5,209,573 + BWI76_RS25015 0.52 +0.6 5,209,692 + BWI76_RS25015 0.62 +1.7 5,209,694 - BWI76_RS25015 0.62 +0.6 5,209,903 + BWI76_RS25015 0.81 +0.0 5,209,923 - BWI76_RS25015 0.83 -0.0
Or see this region's nucleotide sequence