Experiment: KLEB15 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS18470 and BWI76_RS18475 are separated by 71 nucleotides BWI76_RS18475 and BWI76_RS18480 are separated by 140 nucleotides BWI76_RS18480 and BWI76_RS18485 are separated by 157 nucleotides
BWI76_RS18470: BWI76_RS18470 - hypothetical protein, at 3,831,090 to 3,831,522
_RS18470
BWI76_RS18475: BWI76_RS18475 - hypothetical protein, at 3,831,594 to 3,831,983
_RS18475
BWI76_RS18480: BWI76_RS18480 - LysR family transcriptional regulator, at 3,832,124 to 3,833,044
_RS18480
BWI76_RS18485: BWI76_RS18485 - LysR family transcriptional regulator, at 3,833,202 to 3,834,104
_RS18485
Position (kb)
3832
3833
3834 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3831.162 kb on - strand, within BWI76_RS18470 at 3831.284 kb on - strand, within BWI76_RS18470 at 3831.330 kb on + strand, within BWI76_RS18470 at 3831.369 kb on - strand, within BWI76_RS18470 at 3831.592 kb on + strand at 3831.705 kb on + strand, within BWI76_RS18475 at 3831.747 kb on + strand, within BWI76_RS18475 at 3831.754 kb on + strand, within BWI76_RS18475 at 3831.789 kb on + strand, within BWI76_RS18475 at 3831.807 kb on - strand, within BWI76_RS18475 at 3831.820 kb on + strand, within BWI76_RS18475 at 3831.828 kb on - strand, within BWI76_RS18475 at 3831.868 kb on + strand, within BWI76_RS18475 at 3831.935 kb on + strand, within BWI76_RS18475 at 3831.945 kb on + strand at 3831.984 kb on + strand at 3832.003 kb on + strand at 3832.083 kb on + strand at 3832.197 kb on + strand at 3832.220 kb on - strand, within BWI76_RS18480 at 3832.375 kb on - strand, within BWI76_RS18480 at 3832.409 kb on - strand, within BWI76_RS18480 at 3832.434 kb on + strand, within BWI76_RS18480 at 3832.687 kb on + strand, within BWI76_RS18480 at 3832.787 kb on - strand, within BWI76_RS18480 at 3833.272 kb on + strand at 3833.441 kb on - strand, within BWI76_RS18485 at 3833.643 kb on - strand, within BWI76_RS18485 at 3833.758 kb on + strand, within BWI76_RS18485 at 3833.962 kb on - strand, within BWI76_RS18485 at 3833.980 kb on - strand, within BWI76_RS18485 at 3833.995 kb on - strand, within BWI76_RS18485 at 3833.995 kb on - strand, within BWI76_RS18485
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB15 MOI 1 remove 3,831,162 - BWI76_RS18470 0.17 -0.4 3,831,284 - BWI76_RS18470 0.45 -0.1 3,831,330 + BWI76_RS18470 0.55 -0.2 3,831,369 - BWI76_RS18470 0.64 -2.4 3,831,592 + -0.5 3,831,705 + BWI76_RS18475 0.28 -0.5 3,831,747 + BWI76_RS18475 0.39 -0.9 3,831,754 + BWI76_RS18475 0.41 +0.1 3,831,789 + BWI76_RS18475 0.50 -0.4 3,831,807 - BWI76_RS18475 0.55 +0.6 3,831,820 + BWI76_RS18475 0.58 +0.0 3,831,828 - BWI76_RS18475 0.60 +0.0 3,831,868 + BWI76_RS18475 0.70 -0.3 3,831,935 + BWI76_RS18475 0.87 +0.9 3,831,945 + -1.1 3,831,984 + -0.2 3,832,003 + -1.1 3,832,083 + -1.2 3,832,197 + +0.2 3,832,220 - BWI76_RS18480 0.10 -1.5 3,832,375 - BWI76_RS18480 0.27 -1.3 3,832,409 - BWI76_RS18480 0.31 +0.1 3,832,434 + BWI76_RS18480 0.34 -1.1 3,832,687 + BWI76_RS18480 0.61 -0.7 3,832,787 - BWI76_RS18480 0.72 +0.3 3,833,272 + +0.0 3,833,441 - BWI76_RS18485 0.26 -0.3 3,833,643 - BWI76_RS18485 0.49 +1.4 3,833,758 + BWI76_RS18485 0.62 -1.2 3,833,962 - BWI76_RS18485 0.84 +2.2 3,833,980 - BWI76_RS18485 0.86 -0.3 3,833,995 - BWI76_RS18485 0.88 -0.7 3,833,995 - BWI76_RS18485 0.88 -1.0
Or see this region's nucleotide sequence