Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS16170
Experiment: KLEB15 MOI 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | KLEB15 MOI 1 |
---|---|---|---|---|---|
remove | |||||
3,353,544 | - | BWI76_RS16165 | 0.39 | +0.2 | |
3,353,690 | + | BWI76_RS16165 | 0.51 | -0.6 | |
3,353,833 | - | BWI76_RS16165 | 0.61 | -0.7 | |
3,354,553 | - | BWI76_RS16170 | 0.15 | -1.4 | |
3,355,081 | + | BWI76_RS16170 | 0.51 | -0.9 | |
3,355,197 | - | BWI76_RS16170 | 0.59 | -1.9 | |
3,355,441 | - | BWI76_RS16170 | 0.76 | -0.6 | |
3,355,724 | - | -0.1 | |||
3,355,724 | - | -0.7 | |||
3,355,766 | - | +0.3 | |||
3,355,905 | + | +1.0 | |||
3,355,912 | + | -0.4 | |||
3,355,943 | - | -1.3 | |||
3,356,652 | + | BWI76_RS16175 | 0.50 | -0.1 | |
3,356,652 | + | BWI76_RS16175 | 0.50 | -0.8 | |
3,356,677 | - | BWI76_RS16175 | 0.51 | +1.1 | |
3,356,680 | + | BWI76_RS16175 | 0.51 | +0.6 |
Or see this region's nucleotide sequence