Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS15545
Experiment: KLEB15 MOI 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | KLEB15 MOI 1 |
---|---|---|---|---|---|
remove | |||||
3,255,642 | - | BWI76_RS15535 | 0.17 | -0.1 | |
3,255,854 | - | BWI76_RS15535 | 0.62 | -0.4 | |
3,255,979 | + | BWI76_RS15535 | 0.89 | +1.5 | |
3,255,987 | - | -0.7 | |||
3,256,015 | + | +0.7 | |||
3,256,131 | + | BWI76_RS15540 | 0.21 | -0.5 | |
3,256,328 | + | BWI76_RS15540 | 0.62 | -1.5 | |
3,256,375 | - | BWI76_RS15540 | 0.72 | -0.2 | |
3,256,428 | + | BWI76_RS15540 | 0.83 | -0.5 | |
3,256,433 | + | BWI76_RS15540 | 0.84 | +2.7 | |
3,256,433 | + | BWI76_RS15540 | 0.84 | -0.6 | |
3,256,441 | - | BWI76_RS15540 | 0.86 | -1.6 | |
3,256,450 | + | BWI76_RS15540 | 0.88 | -1.1 | |
3,256,623 | - | +1.0 | |||
3,256,664 | + | BWI76_RS15545 | 0.14 | -1.6 | |
3,256,693 | + | BWI76_RS15545 | 0.24 | -1.1 | |
3,256,708 | - | BWI76_RS15545 | 0.29 | -0.9 | |
3,256,796 | + | BWI76_RS15545 | 0.60 | +0.4 | |
3,256,836 | + | BWI76_RS15545 | 0.74 | -0.7 | |
3,256,944 | + | -0.0 | |||
3,257,091 | - | -0.5 | |||
3,257,216 | - | -0.5 | |||
3,257,334 | + | BWI76_RS15550 | 0.14 | +0.1 | |
3,257,404 | - | BWI76_RS15550 | 0.17 | +0.1 | |
3,257,587 | + | BWI76_RS15550 | 0.24 | -0.2 | |
3,257,632 | - | BWI76_RS15550 | 0.26 | -2.2 | |
3,257,632 | - | BWI76_RS15550 | 0.26 | +0.5 | |
3,257,697 | - | BWI76_RS15550 | 0.28 | -1.0 |
Or see this region's nucleotide sequence