Experiment: KLEB15 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS13625 and BWI76_RS13630 are separated by 214 nucleotides BWI76_RS13630 and BWI76_RS13635 overlap by 4 nucleotides BWI76_RS13635 and BWI76_RS13640 are separated by 278 nucleotides
BWI76_RS13625: BWI76_RS13625 - hypothetical protein, at 2,840,009 to 2,840,590
_RS13625
BWI76_RS13630: BWI76_RS13630 - ABC transporter, at 2,840,805 to 2,841,506
_RS13630
BWI76_RS13635: BWI76_RS13635 - extracellular solute-binding protein, at 2,841,503 to 2,842,471
_RS13635
BWI76_RS13640: BWI76_RS13640 - binding-protein-dependent transport system inner membrane protein, at 2,842,750 to 2,844,405
_RS13640
Position (kb)
2841
2842
2843 Strain fitness (log2 ratio)
-1
0
1
2 at 2840.546 kb on - strand at 2840.672 kb on + strand at 2840.701 kb on - strand at 2840.769 kb on + strand at 2840.905 kb on - strand, within BWI76_RS13630 at 2841.158 kb on + strand, within BWI76_RS13630 at 2841.166 kb on - strand, within BWI76_RS13630 at 2841.243 kb on - strand, within BWI76_RS13630 at 2841.320 kb on - strand at 2841.396 kb on + strand, within BWI76_RS13630 at 2841.466 kb on - strand at 2841.823 kb on + strand, within BWI76_RS13635 at 2842.030 kb on - strand, within BWI76_RS13635 at 2842.254 kb on - strand, within BWI76_RS13635 at 2842.957 kb on + strand, within BWI76_RS13640
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB15 MOI 1 remove 2,840,546 - -0.1 2,840,672 + -0.9 2,840,701 - -0.5 2,840,769 + +0.7 2,840,905 - BWI76_RS13630 0.14 +2.0 2,841,158 + BWI76_RS13630 0.50 +0.7 2,841,166 - BWI76_RS13630 0.51 -0.3 2,841,243 - BWI76_RS13630 0.62 +1.1 2,841,320 - +1.4 2,841,396 + BWI76_RS13630 0.84 -1.0 2,841,466 - +0.0 2,841,823 + BWI76_RS13635 0.33 -0.5 2,842,030 - BWI76_RS13635 0.54 -0.8 2,842,254 - BWI76_RS13635 0.78 -1.1 2,842,957 + BWI76_RS13640 0.12 -0.4
Or see this region's nucleotide sequence