Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS17635

Experiment: KLEB15 MOI 10

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KLEB15 MOI 10
3,661,969	+		BWI76_RS17625	0.56	-0.5
3,662,070	-		BWI76_RS17625	0.72	+0.7
3,662,121	-		BWI76_RS17625	0.80	+1.3
3,662,132	+		BWI76_RS17625	0.81	+1.1
3,662,148	+		BWI76_RS17625	0.84	+1.4
3,662,171	-		BWI76_RS17625	0.88	-1.7
3,662,171	-		BWI76_RS17625	0.88	-0.9
3,662,171	-		BWI76_RS17625	0.88	-0.3
3,662,171	-		BWI76_RS17625	0.88	-0.0
3,662,175	+		BWI76_RS17625	0.88	+0.3
3,662,180	+		BWI76_RS17625	0.89	+0.4
3,662,180	+				+3.1
3,662,183	-		BWI76_RS17625	0.90	-0.4
3,662,188	-				-1.3
3,662,189	-				+0.0
3,662,200	-				+0.5
3,662,226	+				+0.2
3,662,226	+				-1.2
3,662,226	+				-1.0
3,662,226	+				-0.7
3,662,226	+				-0.2
3,662,226	+				-1.2
3,662,226	+				-1.8
3,662,226	+				-0.9
3,662,234	-				+0.5
3,662,234	-				+0.8
3,662,234	-				-1.6
3,662,234	-				+0.6
3,662,234	-				+1.1
3,662,234	-				+3.0
3,662,247	+				+0.3
3,662,266	+				+0.9
3,662,292	+				+0.6
3,662,295	-				-0.3
3,662,305	-				+0.1
3,662,352	+		BWI76_RS17630	0.16	+0.3
3,662,355	-		BWI76_RS17630	0.16	-1.4
3,662,355	-		BWI76_RS17630	0.16	-1.2
3,662,360	-		BWI76_RS17630	0.17	-0.4
3,662,360	-		BWI76_RS17630	0.17	+1.7
3,662,362	+		BWI76_RS17630	0.17	+0.7
3,662,362	+		BWI76_RS17630	0.17	-0.8
3,662,365	-		BWI76_RS17630	0.17	-0.0
3,662,420	-		BWI76_RS17630	0.26	+0.4
3,662,420	-		BWI76_RS17630	0.26	+0.7
3,662,423	+		BWI76_RS17630	0.26	+0.2
3,662,442	+		BWI76_RS17630	0.29	+0.4
3,662,442	+		BWI76_RS17630	0.29	+0.2
3,662,442	+		BWI76_RS17630	0.29	+1.9
3,662,442	+		BWI76_RS17630	0.29	-0.1
3,662,442	+		BWI76_RS17630	0.29	+1.1
3,662,442	+		BWI76_RS17630	0.29	+0.6
3,662,442	+		BWI76_RS17630	0.29	-0.4
3,662,450	-		BWI76_RS17630	0.30	+1.2
3,662,450	-		BWI76_RS17630	0.30	+0.5
3,662,466	+		BWI76_RS17630	0.33	+0.2
3,662,466	+		BWI76_RS17630	0.33	+0.3
3,662,466	+		BWI76_RS17630	0.33	-0.4
3,662,497	-		BWI76_RS17630	0.37	+1.0
3,662,554	-		BWI76_RS17630	0.46	-0.1
3,662,557	+		BWI76_RS17630	0.46	+0.8
3,662,565	-		BWI76_RS17630	0.47	+0.0
3,662,565	-		BWI76_RS17630	0.47	+0.3
3,662,568	+		BWI76_RS17630	0.48	+0.6
3,662,568	+		BWI76_RS17630	0.48	-0.4
3,662,568	+		BWI76_RS17630	0.48	+1.0
3,662,568	+		BWI76_RS17630	0.48	-0.1
3,662,568	+		BWI76_RS17630	0.48	+0.5
3,662,568	+		BWI76_RS17630	0.48	-1.3
3,662,575	-		BWI76_RS17630	0.49	+1.8
3,662,576	-		BWI76_RS17630	0.49	-0.1
3,662,576	-		BWI76_RS17630	0.49	+0.4
3,662,576	-		BWI76_RS17630	0.49	+0.1
3,662,576	-		BWI76_RS17630	0.49	+1.2
3,662,576	-		BWI76_RS17630	0.49	-0.3
3,662,576	-		BWI76_RS17630	0.49	+0.6
3,662,576	-		BWI76_RS17630	0.49	+0.3
3,662,587	-				+0.7
3,662,602	-		BWI76_RS17630	0.53	+0.1
3,662,602	-		BWI76_RS17630	0.53	+3.4
3,662,604	+		BWI76_RS17630	0.53	+0.4
3,662,609	-		BWI76_RS17630	0.54	-0.7
3,662,627	+		BWI76_RS17630	0.57	+0.5
3,662,635	-		BWI76_RS17630	0.58	+0.8
3,662,637	+		BWI76_RS17630	0.58	-0.8
3,662,637	+		BWI76_RS17630	0.58	-0.2
3,662,777	-		BWI76_RS17630	0.79	-0.6
3,662,783	+		BWI76_RS17630	0.80	-1.5
3,662,783	+		BWI76_RS17630	0.80	-0.2
3,662,783	+		BWI76_RS17630	0.80	-1.2
3,662,791	-		BWI76_RS17630	0.81	-0.1
3,662,791	-		BWI76_RS17630	0.81	-0.2
3,662,874	+				-0.6
3,662,882	-				+1.0
3,662,888	+				+1.1
3,662,944	+				+0.7
3,662,944	+				-0.1
3,662,944	+				-0.2
3,662,944	+				-0.1
3,662,952	-				+0.3
3,662,952	-				-1.5
3,662,952	-				+0.8
3,662,952	-				+0.7
3,662,952	-				-0.2
3,662,953	+				+0.2
3,662,974	-				-1.2
3,662,985	+				-1.3
3,663,039	-				-0.4
3,663,045	+				-0.4
3,663,046	+				+1.3
3,663,054	-		BWI76_RS17635	0.11	+0.9
3,663,054	-		BWI76_RS17635	0.11	+0.1
3,663,059	-		BWI76_RS17635	0.11	-0.9
3,663,098	-		BWI76_RS17635	0.16	+0.6
3,663,099	-		BWI76_RS17635	0.16	+1.2
3,663,099	-				+1.1
3,663,159	+		BWI76_RS17635	0.22	-0.5
3,663,189	+		BWI76_RS17635	0.26	+0.4
3,663,200	-		BWI76_RS17635	0.27	+1.2
3,663,216	+		BWI76_RS17635	0.29	+0.4
3,663,245	-		BWI76_RS17635	0.32	+0.7
3,663,245	-		BWI76_RS17635	0.32	-0.5
3,663,261	+		BWI76_RS17635	0.34	+0.0
3,663,268	+				+0.1
3,663,281	-		BWI76_RS17635	0.36	+0.9
3,663,284	+		BWI76_RS17635	0.36	+3.2
3,663,292	-		BWI76_RS17635	0.37	-0.4
3,663,294	+		BWI76_RS17635	0.37	+0.8
3,663,294	+		BWI76_RS17635	0.37	+0.4
3,663,294	+		BWI76_RS17635	0.37	+0.4
3,663,302	-		BWI76_RS17635	0.38	-0.0
3,663,319	+		BWI76_RS17635	0.40	-0.5
3,663,319	+		BWI76_RS17635	0.40	+3.4
3,663,319	+		BWI76_RS17635	0.40	-0.9
3,663,319	+		BWI76_RS17635	0.40	-0.1
3,663,319	+		BWI76_RS17635	0.40	-0.1
3,663,327	-		BWI76_RS17635	0.41	+1.7
3,663,327	-		BWI76_RS17635	0.41	+0.3
3,663,327	-		BWI76_RS17635	0.41	+0.1
3,663,329	+		BWI76_RS17635	0.41	+0.9
3,663,329	+		BWI76_RS17635	0.41	-0.7
3,663,337	-		BWI76_RS17635	0.42	+1.4
3,663,337	-		BWI76_RS17635	0.42	-1.1
3,663,348	-		BWI76_RS17635	0.43	-0.6
3,663,415	-		BWI76_RS17635	0.51	+0.5
3,663,424	-		BWI76_RS17635	0.52	-2.5
3,663,609	-		BWI76_RS17635	0.72	-0.2
3,663,611	+		BWI76_RS17635	0.73	+0.5
3,663,760	-		BWI76_RS17635	0.89	+1.1
3,664,024	+				-0.1
3,664,194	+		BWI76_RS17640	0.21	+0.5
3,664,224	+		BWI76_RS17640	0.24	+0.0
3,664,406	-		BWI76_RS17640	0.37	-0.3
3,664,537	+		BWI76_RS17640	0.47	-0.1
3,664,818	+		BWI76_RS17640	0.68	-0.2
3,664,831	-		BWI76_RS17640	0.69	+1.4