Experiment: KLEB15 MOI 10
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS07840 and BWI76_RS07845 are separated by 121 nucleotides BWI76_RS07845 and BWI76_RS07850 are separated by 145 nucleotides
BWI76_RS07840: BWI76_RS07840 - inositol monophosphatase family protein, at 1,663,084 to 1,663,893
_RS07840
BWI76_RS07845: BWI76_RS07845 - LacI family transcriptional regulator, at 1,664,015 to 1,665,004
_RS07845
BWI76_RS07850: BWI76_RS07850 - putative cytosine deaminase-related metal-dependent hydrolase, at 1,665,150 to 1,666,388
_RS07850
Position (kb)
1664
1665
1666 Strain fitness (log2 ratio)
-1
0
1 at 1663.016 kb on - strand at 1663.062 kb on + strand at 1663.379 kb on + strand, within BWI76_RS07840 at 1663.392 kb on + strand, within BWI76_RS07840 at 1663.521 kb on - strand, within BWI76_RS07840 at 1663.652 kb on + strand, within BWI76_RS07840 at 1664.429 kb on - strand, within BWI76_RS07845 at 1664.872 kb on - strand, within BWI76_RS07845 at 1664.928 kb on - strand at 1665.026 kb on - strand at 1665.090 kb on + strand at 1665.183 kb on - strand at 1665.221 kb on - strand at 1665.250 kb on - strand at 1665.323 kb on + strand, within BWI76_RS07850 at 1665.432 kb on - strand, within BWI76_RS07850 at 1665.631 kb on - strand, within BWI76_RS07850 at 1665.681 kb on - strand, within BWI76_RS07850 at 1665.762 kb on + strand, within BWI76_RS07850 at 1665.921 kb on + strand, within BWI76_RS07850
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB15 MOI 10 remove 1,663,016 - +0.1 1,663,062 + +0.2 1,663,379 + BWI76_RS07840 0.36 +1.3 1,663,392 + BWI76_RS07840 0.38 +0.1 1,663,521 - BWI76_RS07840 0.54 -0.4 1,663,652 + BWI76_RS07840 0.70 -1.1 1,664,429 - BWI76_RS07845 0.42 +1.4 1,664,872 - BWI76_RS07845 0.87 +0.4 1,664,928 - -0.7 1,665,026 - -0.1 1,665,090 + -1.4 1,665,183 - +0.3 1,665,221 - +0.5 1,665,250 - -1.0 1,665,323 + BWI76_RS07850 0.14 +0.0 1,665,432 - BWI76_RS07850 0.23 +0.6 1,665,631 - BWI76_RS07850 0.39 +0.2 1,665,681 - BWI76_RS07850 0.43 +0.6 1,665,762 + BWI76_RS07850 0.49 +0.7 1,665,921 + BWI76_RS07850 0.62 +0.1
Or see this region's nucleotide sequence