Experiment: KLEB14 MOI 0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS24725 and BWI76_RS24730 are separated by 18 nucleotides BWI76_RS24730 and BWI76_RS24735 are separated by 482 nucleotides
BWI76_RS24725: BWI76_RS24725 - altronate hydrolase, at 5,155,999 to 5,157,486
_RS24725
BWI76_RS24730: BWI76_RS24730 - uronate isomerase, at 5,157,505 to 5,158,917
_RS24730
BWI76_RS24735: BWI76_RS24735 - MFS transporter, at 5,159,400 to 5,160,701
_RS24735
Position (kb)
5157
5158
5159 Strain fitness (log2 ratio)
-2
-1
0
1 at 5156.827 kb on - strand, within BWI76_RS24725 at 5156.901 kb on - strand, within BWI76_RS24725 at 5157.201 kb on + strand, within BWI76_RS24725 at 5157.351 kb on + strand at 5157.359 kb on - strand at 5157.359 kb on - strand at 5157.359 kb on - strand at 5157.359 kb on - strand at 5157.417 kb on - strand at 5157.483 kb on + strand at 5157.659 kb on + strand, within BWI76_RS24730 at 5157.713 kb on + strand, within BWI76_RS24730 at 5157.903 kb on - strand, within BWI76_RS24730 at 5158.062 kb on - strand, within BWI76_RS24730 at 5158.088 kb on + strand, within BWI76_RS24730 at 5158.259 kb on + strand, within BWI76_RS24730 at 5158.353 kb on - strand, within BWI76_RS24730 at 5158.939 kb on + strand at 5159.208 kb on + strand at 5159.314 kb on - strand at 5159.474 kb on + strand at 5159.482 kb on - strand at 5159.566 kb on - strand, within BWI76_RS24735 at 5159.575 kb on + strand, within BWI76_RS24735 at 5159.585 kb on + strand, within BWI76_RS24735 at 5159.663 kb on - strand, within BWI76_RS24735
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB14 MOI 0.1 remove 5,156,827 - BWI76_RS24725 0.56 -0.2 5,156,901 - BWI76_RS24725 0.61 +1.0 5,157,201 + BWI76_RS24725 0.81 +0.1 5,157,351 + -0.5 5,157,359 - +0.6 5,157,359 - -0.3 5,157,359 - -0.5 5,157,359 - -0.9 5,157,417 - -0.0 5,157,483 + -0.4 5,157,659 + BWI76_RS24730 0.11 -0.2 5,157,713 + BWI76_RS24730 0.15 -0.2 5,157,903 - BWI76_RS24730 0.28 -0.9 5,158,062 - BWI76_RS24730 0.39 -1.8 5,158,088 + BWI76_RS24730 0.41 -0.9 5,158,259 + BWI76_RS24730 0.53 +0.1 5,158,353 - BWI76_RS24730 0.60 -0.4 5,158,939 + -1.3 5,159,208 + -0.2 5,159,314 - +0.0 5,159,474 + -0.2 5,159,482 - -0.3 5,159,566 - BWI76_RS24735 0.13 +0.8 5,159,575 + BWI76_RS24735 0.13 +0.2 5,159,585 + BWI76_RS24735 0.14 -1.2 5,159,663 - BWI76_RS24735 0.20 +0.2
Or see this region's nucleotide sequence