Experiment: KLEB14 MOI 0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS21240 and BWI76_RS21245 are separated by 91 nucleotides BWI76_RS21245 and BWI76_RS21250 are separated by 65 nucleotides BWI76_RS21250 and BWI76_RS21255 overlap by 14 nucleotides BWI76_RS21255 and BWI76_RS21260 are separated by 13 nucleotides
BWI76_RS21240: BWI76_RS21240 - flavohemoprotein, at 4,447,201 to 4,448,391
_RS21240
BWI76_RS21245: BWI76_RS21245 - nitrogen regulatory protein P-II, at 4,448,483 to 4,448,821
_RS21245
BWI76_RS21250: BWI76_RS21250 - two-component system response regulator GlrR, at 4,448,887 to 4,450,224
_RS21250
BWI76_RS21255: BWI76_RS21255 - hypothetical protein, at 4,450,211 to 4,450,915
_RS21255
BWI76_RS21260: BWI76_RS21260 - two-component sensor histidine kinase, at 4,450,929 to 4,452,383
_RS21260
Position (kb) 4448
4449
4450
4451 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 4448.039 kb on - strand, within BWI76_RS21240 at 4448.094 kb on - strand, within BWI76_RS21240 at 4448.109 kb on - strand, within BWI76_RS21240 at 4448.201 kb on - strand, within BWI76_RS21240 at 4448.557 kb on - strand, within BWI76_RS21245 at 4448.578 kb on + strand, within BWI76_RS21245 at 4448.581 kb on - strand, within BWI76_RS21245 at 4448.725 kb on - strand, within BWI76_RS21245 at 4448.887 kb on - strand at 4448.892 kb on + strand at 4448.989 kb on - strand at 4449.382 kb on - strand, within BWI76_RS21250 at 4449.451 kb on + strand, within BWI76_RS21250 at 4449.855 kb on + strand at 4449.875 kb on + strand, within BWI76_RS21250 at 4449.883 kb on - strand, within BWI76_RS21250 at 4449.962 kb on - strand, within BWI76_RS21250 at 4449.962 kb on - strand, within BWI76_RS21250 at 4450.023 kb on + strand, within BWI76_RS21250 at 4450.055 kb on + strand, within BWI76_RS21250 at 4450.420 kb on - strand, within BWI76_RS21255 at 4450.468 kb on - strand, within BWI76_RS21255 at 4450.473 kb on + strand, within BWI76_RS21255 at 4450.481 kb on - strand at 4450.524 kb on - strand, within BWI76_RS21255 at 4450.689 kb on + strand, within BWI76_RS21255 at 4451.054 kb on + strand at 4451.054 kb on + strand at 4451.054 kb on + strand at 4451.062 kb on - strand at 4451.088 kb on - strand, within BWI76_RS21260
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB14 MOI 0.1 remove 4,448,039 - BWI76_RS21240 0.70 +0.5 4,448,094 - BWI76_RS21240 0.75 +0.5 4,448,109 - BWI76_RS21240 0.76 -0.3 4,448,201 - BWI76_RS21240 0.84 -0.8 4,448,557 - BWI76_RS21245 0.22 -2.1 4,448,578 + BWI76_RS21245 0.28 +1.0 4,448,581 - BWI76_RS21245 0.29 +0.9 4,448,725 - BWI76_RS21245 0.71 -0.4 4,448,887 - +1.0 4,448,892 + +0.4 4,448,989 - -0.4 4,449,382 - BWI76_RS21250 0.37 -0.9 4,449,451 + BWI76_RS21250 0.42 +3.0 4,449,855 + +0.9 4,449,875 + BWI76_RS21250 0.74 +2.1 4,449,883 - BWI76_RS21250 0.74 +1.2 4,449,962 - BWI76_RS21250 0.80 +1.5 4,449,962 - BWI76_RS21250 0.80 +1.3 4,450,023 + BWI76_RS21250 0.85 +0.9 4,450,055 + BWI76_RS21250 0.87 +1.5 4,450,420 - BWI76_RS21255 0.30 +0.5 4,450,468 - BWI76_RS21255 0.36 +1.1 4,450,473 + BWI76_RS21255 0.37 +0.2 4,450,481 - -2.9 4,450,524 - BWI76_RS21255 0.44 +1.5 4,450,689 + BWI76_RS21255 0.68 +1.3 4,451,054 + +1.9 4,451,054 + +0.3 4,451,054 + +1.5 4,451,062 - +1.0 4,451,088 - BWI76_RS21260 0.11 +0.8
Or see this region's nucleotide sequence