Experiment: KLEB14 MOI 0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS20510 and BWI76_RS20515 are separated by 254 nucleotides BWI76_RS20515 and BWI76_RS20520 overlap by 4 nucleotides
BWI76_RS20510: BWI76_RS20510 - glucokinase, at 4,295,077 to 4,296,042
_RS20510
BWI76_RS20515: BWI76_RS20515 - ion channel protein, at 4,296,297 to 4,297,532
_RS20515
BWI76_RS20520: BWI76_RS20520 - indolepyruvate decarboxylase, at 4,297,529 to 4,299,190
_RS20520
Position (kb)
4296
4297
4298 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 4295.337 kb on + strand, within BWI76_RS20510 at 4295.468 kb on - strand, within BWI76_RS20510 at 4295.492 kb on - strand, within BWI76_RS20510 at 4295.651 kb on + strand, within BWI76_RS20510 at 4295.723 kb on + strand, within BWI76_RS20510 at 4295.859 kb on + strand, within BWI76_RS20510 at 4295.859 kb on - strand, within BWI76_RS20510 at 4295.870 kb on + strand, within BWI76_RS20510 at 4295.882 kb on + strand, within BWI76_RS20510 at 4295.900 kb on - strand, within BWI76_RS20510 at 4295.910 kb on - strand, within BWI76_RS20510 at 4296.119 kb on + strand at 4296.127 kb on - strand at 4296.127 kb on - strand at 4296.213 kb on - strand at 4296.243 kb on + strand at 4296.272 kb on - strand at 4296.428 kb on + strand, within BWI76_RS20515 at 4296.637 kb on + strand at 4296.645 kb on - strand, within BWI76_RS20515 at 4296.779 kb on - strand, within BWI76_RS20515 at 4296.955 kb on - strand, within BWI76_RS20515 at 4297.144 kb on - strand, within BWI76_RS20515 at 4297.176 kb on - strand, within BWI76_RS20515 at 4297.311 kb on - strand, within BWI76_RS20515 at 4297.557 kb on - strand at 4297.561 kb on + strand at 4297.626 kb on - strand at 4297.842 kb on - strand, within BWI76_RS20520 at 4297.905 kb on + strand, within BWI76_RS20520 at 4298.009 kb on - strand, within BWI76_RS20520 at 4298.265 kb on - strand, within BWI76_RS20520 at 4298.302 kb on + strand, within BWI76_RS20520 at 4298.302 kb on + strand, within BWI76_RS20520
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB14 MOI 0.1 remove 4,295,337 + BWI76_RS20510 0.27 +0.3 4,295,468 - BWI76_RS20510 0.40 -0.7 4,295,492 - BWI76_RS20510 0.43 -1.4 4,295,651 + BWI76_RS20510 0.59 +0.1 4,295,723 + BWI76_RS20510 0.67 -1.5 4,295,859 + BWI76_RS20510 0.81 -0.0 4,295,859 - BWI76_RS20510 0.81 -0.9 4,295,870 + BWI76_RS20510 0.82 -3.6 4,295,882 + BWI76_RS20510 0.83 -0.1 4,295,900 - BWI76_RS20510 0.85 -1.3 4,295,910 - BWI76_RS20510 0.86 -1.6 4,296,119 + -1.3 4,296,127 - +0.1 4,296,127 - -1.6 4,296,213 - -0.3 4,296,243 + -1.1 4,296,272 - +0.1 4,296,428 + BWI76_RS20515 0.11 +1.4 4,296,637 + +1.4 4,296,645 - BWI76_RS20515 0.28 +0.3 4,296,779 - BWI76_RS20515 0.39 +0.7 4,296,955 - BWI76_RS20515 0.53 +0.7 4,297,144 - BWI76_RS20515 0.69 +1.3 4,297,176 - BWI76_RS20515 0.71 +0.6 4,297,311 - BWI76_RS20515 0.82 +0.0 4,297,557 - -1.1 4,297,561 + -0.1 4,297,626 - -0.3 4,297,842 - BWI76_RS20520 0.19 +1.1 4,297,905 + BWI76_RS20520 0.23 -0.4 4,298,009 - BWI76_RS20520 0.29 +0.9 4,298,265 - BWI76_RS20520 0.44 +0.1 4,298,302 + BWI76_RS20520 0.47 -0.2 4,298,302 + BWI76_RS20520 0.47 +3.4
Or see this region's nucleotide sequence