Experiment: KLEB14 MOI 0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt
BWI76_RS18995: BWI76_RS18995 - NAD-dependent epimerase, at 3,941,100 to 3,942,104
_RS18995
Position (kb)
3941
3942
3943 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3
4 at 3940.275 kb on - strand at 3940.287 kb on + strand at 3940.348 kb on + strand at 3940.351 kb on - strand at 3940.356 kb on - strand at 3940.383 kb on + strand at 3940.383 kb on + strand at 3940.387 kb on - strand at 3940.391 kb on - strand at 3940.397 kb on - strand at 3940.408 kb on + strand at 3940.409 kb on + strand at 3940.416 kb on - strand at 3940.478 kb on + strand at 3940.486 kb on - strand at 3940.514 kb on + strand at 3940.514 kb on + strand at 3940.514 kb on + strand at 3940.514 kb on + strand at 3940.522 kb on - strand at 3940.522 kb on - strand at 3940.522 kb on - strand at 3940.522 kb on - strand at 3940.523 kb on - strand at 3940.553 kb on + strand at 3940.571 kb on + strand at 3940.581 kb on + strand at 3940.583 kb on + strand at 3940.586 kb on + strand at 3940.586 kb on + strand at 3940.586 kb on + strand at 3940.586 kb on + strand at 3940.588 kb on + strand at 3940.594 kb on - strand at 3940.594 kb on - strand at 3940.594 kb on - strand at 3940.596 kb on - strand at 3940.605 kb on + strand at 3940.609 kb on + strand at 3940.610 kb on + strand at 3940.617 kb on - strand at 3940.618 kb on - strand at 3940.639 kb on + strand at 3940.850 kb on + strand at 3940.850 kb on + strand at 3940.850 kb on - strand at 3940.857 kb on + strand at 3940.858 kb on - strand at 3940.860 kb on - strand at 3940.881 kb on - strand at 3940.898 kb on - strand at 3940.964 kb on + strand at 3940.972 kb on - strand at 3941.004 kb on + strand at 3941.031 kb on + strand at 3941.039 kb on + strand at 3941.039 kb on - strand at 3941.042 kb on - strand at 3941.071 kb on + strand at 3941.851 kb on + strand, within BWI76_RS18995 at 3942.079 kb on + strand at 3942.079 kb on + strand at 3942.079 kb on + strand at 3942.079 kb on + strand at 3942.079 kb on + strand at 3942.079 kb on + strand at 3942.079 kb on + strand at 3942.079 kb on + strand at 3942.079 kb on + strand at 3942.079 kb on + strand at 3942.079 kb on + strand at 3942.079 kb on + strand at 3942.079 kb on + strand at 3942.079 kb on + strand at 3942.079 kb on + strand at 3942.092 kb on + strand at 3942.092 kb on + strand at 3942.092 kb on + strand at 3942.098 kb on + strand at 3942.103 kb on + strand at 3942.103 kb on + strand at 3942.103 kb on + strand at 3942.116 kb on - strand at 3942.117 kb on + strand at 3942.125 kb on + strand at 3942.125 kb on + strand at 3942.133 kb on - strand at 3942.141 kb on + strand at 3942.141 kb on + strand at 3942.219 kb on + strand at 3942.227 kb on - strand at 3942.227 kb on - strand at 3942.304 kb on + strand at 3942.498 kb on + strand at 3942.506 kb on - strand at 3942.508 kb on + strand at 3942.508 kb on + strand at 3942.516 kb on - strand at 3942.576 kb on + strand at 3942.590 kb on - strand at 3942.593 kb on + strand at 3942.614 kb on + strand at 3942.622 kb on - strand at 3942.786 kb on - strand at 3942.789 kb on - strand at 3942.791 kb on - strand at 3942.833 kb on - strand at 3942.857 kb on - strand at 3942.857 kb on - strand at 3942.908 kb on + strand at 3942.910 kb on - strand at 3942.916 kb on - strand at 3942.947 kb on - strand at 3942.966 kb on + strand at 3942.984 kb on - strand at 3942.989 kb on - strand at 3943.047 kb on - strand at 3943.066 kb on - strand at 3943.075 kb on - strand at 3943.088 kb on + strand at 3943.091 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB14 MOI 0.1 remove 3,940,275 - +0.2 3,940,287 + +0.8 3,940,348 + +0.3 3,940,351 - +0.5 3,940,356 - -0.7 3,940,383 + +1.3 3,940,383 + +2.2 3,940,387 - +1.8 3,940,391 - +0.3 3,940,397 - +1.1 3,940,408 + +0.4 3,940,409 + +1.2 3,940,416 - +0.6 3,940,478 + +2.4 3,940,486 - -0.5 3,940,514 + +1.9 3,940,514 + +0.7 3,940,514 + +1.8 3,940,514 + +0.8 3,940,522 - +0.3 3,940,522 - +1.0 3,940,522 - +0.0 3,940,522 - +0.2 3,940,523 - +0.4 3,940,553 + -0.4 3,940,571 + +1.5 3,940,581 + +1.5 3,940,583 + +1.2 3,940,586 + +3.0 3,940,586 + +1.5 3,940,586 + +0.0 3,940,586 + +0.9 3,940,588 + +3.8 3,940,594 - -0.4 3,940,594 - +0.6 3,940,594 - +0.8 3,940,596 - +0.4 3,940,605 + -0.1 3,940,609 + +0.8 3,940,610 + +0.8 3,940,617 - -0.1 3,940,618 - -0.1 3,940,639 + +1.3 3,940,850 + +0.4 3,940,850 + +0.8 3,940,850 - -1.0 3,940,857 + +0.0 3,940,858 - +1.0 3,940,860 - -0.6 3,940,881 - +0.8 3,940,898 - +1.5 3,940,964 + +1.6 3,940,972 - -0.2 3,941,004 + +0.8 3,941,031 + +0.3 3,941,039 + -0.3 3,941,039 - +0.3 3,941,042 - +0.8 3,941,071 + -0.2 3,941,851 + BWI76_RS18995 0.75 +1.5 3,942,079 + -0.1 3,942,079 + -1.0 3,942,079 + +1.3 3,942,079 + -0.5 3,942,079 + -1.4 3,942,079 + +0.4 3,942,079 + +0.6 3,942,079 + +1.3 3,942,079 + +0.9 3,942,079 + +1.7 3,942,079 + +1.2 3,942,079 + +0.3 3,942,079 + +0.6 3,942,079 + +0.5 3,942,079 + +0.2 3,942,092 + -0.1 3,942,092 + +2.1 3,942,092 + -0.3 3,942,098 + -2.6 3,942,103 + +1.1 3,942,103 + +0.1 3,942,103 + +0.8 3,942,116 - +1.5 3,942,117 + -0.8 3,942,125 + +0.9 3,942,125 + -0.5 3,942,133 - +1.4 3,942,141 + -0.3 3,942,141 + -0.5 3,942,219 + +0.5 3,942,227 - -2.7 3,942,227 - +2.7 3,942,304 + -3.3 3,942,498 + +0.2 3,942,506 - -1.2 3,942,508 + -0.5 3,942,508 + +1.2 3,942,516 - -1.3 3,942,576 + +0.1 3,942,590 - +1.9 3,942,593 + -4.5 3,942,614 + +2.0 3,942,622 - -1.0 3,942,786 - +1.7 3,942,789 - +1.2 3,942,791 - -1.8 3,942,833 - -0.5 3,942,857 - +0.0 3,942,857 - -0.8 3,942,908 + -2.6 3,942,910 - +1.2 3,942,916 - -2.0 3,942,947 - -1.2 3,942,966 + +1.5 3,942,984 - +0.2 3,942,989 - -1.4 3,943,047 - +0.6 3,943,066 - -1.0 3,943,075 - +0.1 3,943,088 + +1.5 3,943,091 - -0.2
Or see this region's nucleotide sequence