Experiment: KLEB14 MOI 0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS13055 and BWI76_RS13060 are separated by 226 nucleotides BWI76_RS13060 and BWI76_RS13065 are separated by 120 nucleotides BWI76_RS13065 and BWI76_RS13070 are separated by 47 nucleotides BWI76_RS13070 and BWI76_RS13075 are separated by 231 nucleotides
BWI76_RS13055: BWI76_RS13055 - NmrA family protein, at 2,723,254 to 2,724,165
_RS13055
BWI76_RS13060: BWI76_RS13060 - glutathione S-transferase, at 2,724,392 to 2,724,997
_RS13060
BWI76_RS13065: BWI76_RS13065 - LysR family transcriptional regulator, at 2,725,118 to 2,725,993
_RS13065
BWI76_RS13070: BWI76_RS13070 - hypothetical protein, at 2,726,041 to 2,726,268
_RS13070
BWI76_RS13075: BWI76_RS13075 - cupin, at 2,726,500 to 2,726,832
_RS13075
Position (kb)
2725
2726 Strain fitness (log2 ratio)
-2
-1
0
1 at 2724.139 kb on + strand at 2724.509 kb on + strand, within BWI76_RS13060 at 2724.509 kb on + strand, within BWI76_RS13060 at 2724.647 kb on - strand, within BWI76_RS13060 at 2724.649 kb on + strand, within BWI76_RS13060 at 2724.954 kb on - strand at 2725.215 kb on - strand, within BWI76_RS13065 at 2725.217 kb on + strand, within BWI76_RS13065 at 2725.261 kb on + strand, within BWI76_RS13065 at 2725.342 kb on + strand, within BWI76_RS13065 at 2725.387 kb on - strand, within BWI76_RS13065 at 2725.668 kb on + strand, within BWI76_RS13065 at 2726.069 kb on - strand, within BWI76_RS13070 at 2726.205 kb on - strand, within BWI76_RS13070
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB14 MOI 0.1 remove 2,724,139 + +0.3 2,724,509 + BWI76_RS13060 0.19 -0.8 2,724,509 + BWI76_RS13060 0.19 -0.5 2,724,647 - BWI76_RS13060 0.42 -0.8 2,724,649 + BWI76_RS13060 0.42 +1.2 2,724,954 - +1.3 2,725,215 - BWI76_RS13065 0.11 -1.7 2,725,217 + BWI76_RS13065 0.11 -0.9 2,725,261 + BWI76_RS13065 0.16 +1.3 2,725,342 + BWI76_RS13065 0.26 -2.0 2,725,387 - BWI76_RS13065 0.31 -0.6 2,725,668 + BWI76_RS13065 0.63 -0.1 2,726,069 - BWI76_RS13070 0.12 +0.1 2,726,205 - BWI76_RS13070 0.72 -1.3
Or see this region's nucleotide sequence