Experiment: KLEB13 MOI 0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS23615 and BWI76_RS23620 overlap by 4 nucleotides BWI76_RS23620 and BWI76_RS23625 overlap by 4 nucleotides
BWI76_RS23615: BWI76_RS23615 - multidrug transporter, at 4,923,292 to 4,925,235
_RS23615
BWI76_RS23620: BWI76_RS23620 - multidrug resistance transporter, at 4,925,232 to 4,926,710
_RS23620
BWI76_RS23625: BWI76_RS23625 - helix-turn-helix transcriptional regulator, at 4,926,707 to 4,929,418
_RS23625
Position (kb)
4925
4926
4927 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 4924.341 kb on + strand, within BWI76_RS23615 at 4924.520 kb on - strand, within BWI76_RS23615 at 4924.589 kb on + strand, within BWI76_RS23615 at 4924.682 kb on - strand, within BWI76_RS23615 at 4924.700 kb on + strand, within BWI76_RS23615 at 4924.717 kb on + strand, within BWI76_RS23615 at 4924.725 kb on - strand, within BWI76_RS23615 at 4924.802 kb on - strand, within BWI76_RS23615 at 4924.876 kb on + strand, within BWI76_RS23615 at 4924.909 kb on - strand, within BWI76_RS23615 at 4925.081 kb on + strand at 4925.393 kb on - strand, within BWI76_RS23620 at 4925.566 kb on - strand, within BWI76_RS23620 at 4925.596 kb on + strand, within BWI76_RS23620 at 4925.604 kb on - strand, within BWI76_RS23620 at 4925.802 kb on - strand, within BWI76_RS23620 at 4925.833 kb on - strand, within BWI76_RS23620 at 4925.894 kb on - strand, within BWI76_RS23620 at 4925.900 kb on + strand, within BWI76_RS23620 at 4925.901 kb on - strand, within BWI76_RS23620 at 4926.115 kb on + strand, within BWI76_RS23620 at 4926.115 kb on + strand, within BWI76_RS23620 at 4926.285 kb on - strand, within BWI76_RS23620 at 4926.392 kb on + strand, within BWI76_RS23620 at 4926.637 kb on + strand at 4926.694 kb on - strand at 4926.841 kb on + strand at 4927.036 kb on + strand, within BWI76_RS23625 at 4927.176 kb on + strand, within BWI76_RS23625 at 4927.191 kb on - strand, within BWI76_RS23625 at 4927.229 kb on - strand, within BWI76_RS23625 at 4927.540 kb on + strand, within BWI76_RS23625 at 4927.614 kb on - strand, within BWI76_RS23625 at 4927.647 kb on - strand, within BWI76_RS23625 at 4927.688 kb on - strand, within BWI76_RS23625
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB13 MOI 0.1 remove 4,924,341 + BWI76_RS23615 0.54 +0.3 4,924,520 - BWI76_RS23615 0.63 +1.8 4,924,589 + BWI76_RS23615 0.67 +0.8 4,924,682 - BWI76_RS23615 0.72 +1.6 4,924,700 + BWI76_RS23615 0.72 +0.0 4,924,717 + BWI76_RS23615 0.73 +0.4 4,924,725 - BWI76_RS23615 0.74 +0.7 4,924,802 - BWI76_RS23615 0.78 -1.1 4,924,876 + BWI76_RS23615 0.81 +0.2 4,924,909 - BWI76_RS23615 0.83 -0.9 4,925,081 + -4.1 4,925,393 - BWI76_RS23620 0.11 +1.1 4,925,566 - BWI76_RS23620 0.23 +0.4 4,925,596 + BWI76_RS23620 0.25 +0.8 4,925,604 - BWI76_RS23620 0.25 +0.5 4,925,802 - BWI76_RS23620 0.39 +0.6 4,925,833 - BWI76_RS23620 0.41 +1.4 4,925,894 - BWI76_RS23620 0.45 +0.3 4,925,900 + BWI76_RS23620 0.45 -0.4 4,925,901 - BWI76_RS23620 0.45 -0.1 4,926,115 + BWI76_RS23620 0.60 -0.7 4,926,115 + BWI76_RS23620 0.60 +0.3 4,926,285 - BWI76_RS23620 0.71 +0.2 4,926,392 + BWI76_RS23620 0.78 +0.6 4,926,637 + +2.6 4,926,694 - +0.4 4,926,841 + +0.7 4,927,036 + BWI76_RS23625 0.12 +0.8 4,927,176 + BWI76_RS23625 0.17 +0.4 4,927,191 - BWI76_RS23625 0.18 +0.8 4,927,229 - BWI76_RS23625 0.19 -0.3 4,927,540 + BWI76_RS23625 0.31 -0.1 4,927,614 - BWI76_RS23625 0.33 -0.3 4,927,647 - BWI76_RS23625 0.35 +0.4 4,927,688 - BWI76_RS23625 0.36 -0.9
Or see this region's nucleotide sequence