Experiment: KLEB13 MOI 0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS15915 and BWI76_RS15920 are separated by 102 nucleotides BWI76_RS15920 and BWI76_RS15925 are separated by 148 nucleotides BWI76_RS15925 and BWI76_RS15930 are separated by 10 nucleotides BWI76_RS15930 and BWI76_RS15935 are separated by 1 nucleotides
BWI76_RS15915: BWI76_RS15915 - YnfC family lipoprotein, at 3,301,046 to 3,301,756
_RS15915
BWI76_RS15920: BWI76_RS15920 - hypothetical protein, at 3,301,859 to 3,302,110
_RS15920
BWI76_RS15925: BWI76_RS15925 - dimethyl sulfoxide reductase subunit A, at 3,302,259 to 3,304,694
_RS15925
BWI76_RS15930: BWI76_RS15930 - dimethylsulfoxide reductase, chain B, at 3,304,705 to 3,305,322
_RS15930
BWI76_RS15935: BWI76_RS15935 - dimethyl sulfoxide reductase, at 3,305,324 to 3,306,181
_RS15935
Position (kb)
3302
3303
3304
3305 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3301.677 kb on + strand, within BWI76_RS15915 at 3301.689 kb on + strand at 3301.702 kb on + strand at 3301.779 kb on - strand at 3301.871 kb on + strand at 3301.887 kb on - strand, within BWI76_RS15920 at 3302.134 kb on - strand at 3302.473 kb on - strand at 3302.857 kb on - strand, within BWI76_RS15925 at 3302.887 kb on - strand, within BWI76_RS15925 at 3303.716 kb on + strand, within BWI76_RS15925 at 3303.748 kb on - strand, within BWI76_RS15925 at 3304.008 kb on - strand, within BWI76_RS15925 at 3304.663 kb on + strand at 3304.928 kb on + strand, within BWI76_RS15930 at 3304.928 kb on + strand, within BWI76_RS15930 at 3304.936 kb on - strand, within BWI76_RS15930 at 3304.936 kb on - strand, within BWI76_RS15930 at 3305.042 kb on + strand, within BWI76_RS15930
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB13 MOI 0.1 remove 3,301,677 + BWI76_RS15915 0.89 +0.3 3,301,689 + -0.9 3,301,702 + -1.4 3,301,779 - +1.4 3,301,871 + -1.3 3,301,887 - BWI76_RS15920 0.11 -1.1 3,302,134 - -0.3 3,302,473 - -0.0 3,302,857 - BWI76_RS15925 0.25 -0.9 3,302,887 - BWI76_RS15925 0.26 -0.7 3,303,716 + BWI76_RS15925 0.60 -1.1 3,303,748 - BWI76_RS15925 0.61 -0.9 3,304,008 - BWI76_RS15925 0.72 -1.0 3,304,663 + -2.8 3,304,928 + BWI76_RS15930 0.36 -1.6 3,304,928 + BWI76_RS15930 0.36 +1.0 3,304,936 - BWI76_RS15930 0.37 -0.9 3,304,936 - BWI76_RS15930 0.37 -0.9 3,305,042 + BWI76_RS15930 0.55 +0.4
Or see this region's nucleotide sequence