Experiment: KLEB13 MOI 0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS13920 and BWI76_RS13925 are separated by 261 nucleotides BWI76_RS13925 and BWI76_RS13930 are separated by 265 nucleotides
BWI76_RS13920: BWI76_RS13920 - magnesium-translocating P-type ATPase, at 2,904,171 to 2,906,903
_RS13920
BWI76_RS13925: BWI76_RS13925 - catalase/peroxidase HPI, at 2,907,165 to 2,909,348
_RS13925
BWI76_RS13930: BWI76_RS13930 - putative LysR-family transcriptional regulator, at 2,909,614 to 2,910,546
_RS13930
Position (kb)
2907
2908
2909
2910 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4
5 at 2906.322 kb on - strand, within BWI76_RS13920 at 2906.606 kb on + strand, within BWI76_RS13920 at 2907.013 kb on + strand at 2907.707 kb on - strand, within BWI76_RS13925 at 2907.808 kb on - strand, within BWI76_RS13925 at 2908.205 kb on + strand, within BWI76_RS13925 at 2908.546 kb on - strand, within BWI76_RS13925 at 2908.644 kb on - strand, within BWI76_RS13925 at 2908.663 kb on + strand, within BWI76_RS13925 at 2909.003 kb on + strand, within BWI76_RS13925 at 2909.021 kb on - strand at 2909.081 kb on + strand, within BWI76_RS13925 at 2909.526 kb on + strand at 2909.557 kb on - strand at 2909.626 kb on + strand at 2909.626 kb on + strand at 2909.634 kb on - strand at 2909.962 kb on - strand, within BWI76_RS13930 at 2910.272 kb on - strand, within BWI76_RS13930
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB13 MOI 0.1 remove 2,906,322 - BWI76_RS13920 0.79 +5.5 2,906,606 + BWI76_RS13920 0.89 -0.0 2,907,013 + -0.9 2,907,707 - BWI76_RS13925 0.25 +0.1 2,907,808 - BWI76_RS13925 0.29 +2.2 2,908,205 + BWI76_RS13925 0.48 -3.3 2,908,546 - BWI76_RS13925 0.63 +0.7 2,908,644 - BWI76_RS13925 0.68 +0.1 2,908,663 + BWI76_RS13925 0.69 -1.6 2,909,003 + BWI76_RS13925 0.84 +2.0 2,909,021 - -0.5 2,909,081 + BWI76_RS13925 0.88 +0.6 2,909,526 + +0.3 2,909,557 - -0.8 2,909,626 + +1.8 2,909,626 + +1.8 2,909,634 - -0.4 2,909,962 - BWI76_RS13930 0.37 -1.6 2,910,272 - BWI76_RS13930 0.71 +2.1
Or see this region's nucleotide sequence