Experiment: KLEB13 MOI 0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS13035 and BWI76_RS13040 are separated by 102 nucleotides BWI76_RS13040 and BWI76_RS13045 are separated by 161 nucleotides BWI76_RS13045 and BWI76_RS13050 are separated by 148 nucleotides
BWI76_RS13035: BWI76_RS13035 - MFS transporter, at 2,719,625 to 2,721,079
_RS13035
BWI76_RS13040: BWI76_RS13040 - transcriptional regulator, at 2,721,182 to 2,721,985
_RS13040
BWI76_RS13045: BWI76_RS13045 - hypothetical protein, at 2,722,147 to 2,722,542
_RS13045
BWI76_RS13050: BWI76_RS13050 - transcriptional regulator, at 2,722,691 to 2,723,125
_RS13050
Position (kb)
2721
2722 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2720.199 kb on + strand, within BWI76_RS13035 at 2720.226 kb on - strand, within BWI76_RS13035 at 2720.226 kb on - strand, within BWI76_RS13035 at 2720.354 kb on + strand, within BWI76_RS13035 at 2720.354 kb on + strand, within BWI76_RS13035 at 2720.369 kb on + strand, within BWI76_RS13035 at 2720.377 kb on - strand at 2720.377 kb on - strand, within BWI76_RS13035 at 2720.403 kb on + strand, within BWI76_RS13035 at 2720.444 kb on + strand, within BWI76_RS13035 at 2720.452 kb on - strand, within BWI76_RS13035 at 2720.611 kb on + strand, within BWI76_RS13035 at 2720.611 kb on + strand, within BWI76_RS13035 at 2720.619 kb on - strand, within BWI76_RS13035 at 2720.619 kb on - strand, within BWI76_RS13035 at 2720.699 kb on + strand, within BWI76_RS13035 at 2720.783 kb on - strand, within BWI76_RS13035 at 2720.793 kb on - strand, within BWI76_RS13035 at 2720.934 kb on - strand at 2720.934 kb on - strand at 2721.055 kb on + strand at 2721.094 kb on + strand at 2721.645 kb on - strand, within BWI76_RS13040 at 2721.696 kb on + strand, within BWI76_RS13040 at 2721.718 kb on - strand, within BWI76_RS13040 at 2721.776 kb on - strand, within BWI76_RS13040 at 2722.076 kb on - strand at 2722.084 kb on + strand at 2722.193 kb on - strand, within BWI76_RS13045 at 2722.193 kb on - strand, within BWI76_RS13045 at 2722.350 kb on - strand, within BWI76_RS13045 at 2722.350 kb on - strand, within BWI76_RS13045 at 2722.356 kb on + strand, within BWI76_RS13045 at 2722.393 kb on + strand, within BWI76_RS13045 at 2722.416 kb on - strand, within BWI76_RS13045 at 2722.472 kb on - strand, within BWI76_RS13045 at 2722.590 kb on + strand at 2722.672 kb on + strand at 2722.673 kb on + strand at 2722.701 kb on + strand at 2722.920 kb on - strand, within BWI76_RS13050
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB13 MOI 0.1 remove 2,720,199 + BWI76_RS13035 0.39 +0.2 2,720,226 - BWI76_RS13035 0.41 +1.1 2,720,226 - BWI76_RS13035 0.41 +1.1 2,720,354 + BWI76_RS13035 0.50 -1.1 2,720,354 + BWI76_RS13035 0.50 +1.3 2,720,369 + BWI76_RS13035 0.51 -0.8 2,720,377 - +2.8 2,720,377 - BWI76_RS13035 0.52 +0.6 2,720,403 + BWI76_RS13035 0.53 +1.2 2,720,444 + BWI76_RS13035 0.56 +0.1 2,720,452 - BWI76_RS13035 0.57 -0.4 2,720,611 + BWI76_RS13035 0.68 +1.0 2,720,611 + BWI76_RS13035 0.68 +0.6 2,720,619 - BWI76_RS13035 0.68 -0.5 2,720,619 - BWI76_RS13035 0.68 -0.2 2,720,699 + BWI76_RS13035 0.74 +0.4 2,720,783 - BWI76_RS13035 0.80 -0.3 2,720,793 - BWI76_RS13035 0.80 +0.8 2,720,934 - +0.9 2,720,934 - -0.9 2,721,055 + -0.6 2,721,094 + -0.4 2,721,645 - BWI76_RS13040 0.58 -1.9 2,721,696 + BWI76_RS13040 0.64 -0.5 2,721,718 - BWI76_RS13040 0.67 -1.3 2,721,776 - BWI76_RS13040 0.74 -0.3 2,722,076 - +0.8 2,722,084 + +0.6 2,722,193 - BWI76_RS13045 0.12 -1.0 2,722,193 - BWI76_RS13045 0.12 -2.0 2,722,350 - BWI76_RS13045 0.51 -0.2 2,722,350 - BWI76_RS13045 0.51 -3.5 2,722,356 + BWI76_RS13045 0.53 -0.7 2,722,393 + BWI76_RS13045 0.62 +1.0 2,722,416 - BWI76_RS13045 0.68 +0.1 2,722,472 - BWI76_RS13045 0.82 -1.1 2,722,590 + -0.8 2,722,672 + +1.0 2,722,673 + -0.5 2,722,701 + -0.5 2,722,920 - BWI76_RS13050 0.53 -1.1
Or see this region's nucleotide sequence