Experiment: KLEB13 MOI 0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS12730 and BWI76_RS12735 are separated by 623 nucleotides BWI76_RS12735 and BWI76_RS12740 are separated by 427 nucleotides BWI76_RS12740 and BWI76_RS12745 are separated by 76 nucleotides
BWI76_RS12730: BWI76_RS12730 - pyruvate:ferredoxin (flavodoxin) oxidoreductase, at 2,653,158 to 2,656,685
_RS12730
BWI76_RS12735: BWI76_RS12735 - phage repressor protein, at 2,657,309 to 2,657,845
_RS12735
BWI76_RS12740: BWI76_RS12740 - hypothetical protein, at 2,658,273 to 2,658,635
_RS12740
BWI76_RS12745: BWI76_RS12745 - putative prophage membrane protein, at 2,658,712 to 2,659,104
_RS12745
Position (kb)
2657
2658 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2656.757 kb on + strand at 2656.761 kb on - strand at 2656.952 kb on + strand at 2657.221 kb on + strand at 2657.268 kb on + strand at 2657.276 kb on - strand at 2657.441 kb on + strand, within BWI76_RS12735 at 2657.759 kb on + strand, within BWI76_RS12735 at 2657.826 kb on + strand at 2658.223 kb on - strand at 2658.237 kb on + strand at 2658.264 kb on - strand at 2658.264 kb on - strand at 2658.358 kb on + strand, within BWI76_RS12740 at 2658.361 kb on - strand, within BWI76_RS12740 at 2658.366 kb on - strand, within BWI76_RS12740 at 2658.366 kb on - strand, within BWI76_RS12740 at 2658.377 kb on + strand, within BWI76_RS12740 at 2658.385 kb on - strand, within BWI76_RS12740 at 2658.398 kb on + strand, within BWI76_RS12740 at 2658.398 kb on + strand, within BWI76_RS12740 at 2658.404 kb on + strand, within BWI76_RS12740 at 2658.406 kb on - strand, within BWI76_RS12740 at 2658.406 kb on - strand, within BWI76_RS12740 at 2658.406 kb on - strand at 2658.412 kb on - strand, within BWI76_RS12740 at 2658.412 kb on - strand, within BWI76_RS12740 at 2658.417 kb on + strand, within BWI76_RS12740 at 2658.419 kb on + strand, within BWI76_RS12740 at 2658.419 kb on + strand, within BWI76_RS12740 at 2658.422 kb on - strand, within BWI76_RS12740 at 2658.425 kb on - strand, within BWI76_RS12740 at 2658.427 kb on - strand, within BWI76_RS12740 at 2658.427 kb on - strand, within BWI76_RS12740 at 2658.430 kb on + strand, within BWI76_RS12740 at 2658.430 kb on + strand, within BWI76_RS12740 at 2658.430 kb on + strand, within BWI76_RS12740 at 2658.430 kb on + strand, within BWI76_RS12740 at 2658.436 kb on - strand, within BWI76_RS12740 at 2658.438 kb on - strand, within BWI76_RS12740 at 2658.438 kb on - strand, within BWI76_RS12740 at 2658.438 kb on - strand, within BWI76_RS12740 at 2658.438 kb on - strand, within BWI76_RS12740 at 2658.438 kb on - strand, within BWI76_RS12740 at 2658.478 kb on - strand, within BWI76_RS12740 at 2658.548 kb on + strand, within BWI76_RS12740 at 2658.556 kb on - strand, within BWI76_RS12740 at 2658.619 kb on + strand at 2658.631 kb on + strand at 2658.638 kb on + strand at 2658.646 kb on - strand at 2658.689 kb on - strand at 2658.696 kb on + strand at 2658.704 kb on - strand at 2658.708 kb on + strand at 2658.714 kb on - strand at 2658.714 kb on - strand at 2658.716 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB13 MOI 0.1 remove 2,656,757 + -0.2 2,656,761 - +0.9 2,656,952 + +0.2 2,657,221 + +0.3 2,657,268 + +1.3 2,657,276 - +0.1 2,657,441 + BWI76_RS12735 0.25 -1.3 2,657,759 + BWI76_RS12735 0.84 -1.5 2,657,826 + +1.8 2,658,223 - +0.8 2,658,237 + -2.2 2,658,264 - -0.0 2,658,264 - +1.1 2,658,358 + BWI76_RS12740 0.23 -0.5 2,658,361 - BWI76_RS12740 0.24 -0.1 2,658,366 - BWI76_RS12740 0.26 +0.3 2,658,366 - BWI76_RS12740 0.26 +0.4 2,658,377 + BWI76_RS12740 0.29 -2.7 2,658,385 - BWI76_RS12740 0.31 +0.1 2,658,398 + BWI76_RS12740 0.34 +1.1 2,658,398 + BWI76_RS12740 0.34 -1.4 2,658,404 + BWI76_RS12740 0.36 -0.6 2,658,406 - BWI76_RS12740 0.37 +1.8 2,658,406 - BWI76_RS12740 0.37 +3.1 2,658,406 - -0.5 2,658,412 - BWI76_RS12740 0.38 +0.1 2,658,412 - BWI76_RS12740 0.38 -0.7 2,658,417 + BWI76_RS12740 0.40 +2.1 2,658,419 + BWI76_RS12740 0.40 -1.5 2,658,419 + BWI76_RS12740 0.40 -1.3 2,658,422 - BWI76_RS12740 0.41 -1.1 2,658,425 - BWI76_RS12740 0.42 -0.2 2,658,427 - BWI76_RS12740 0.42 +0.1 2,658,427 - BWI76_RS12740 0.42 +0.3 2,658,430 + BWI76_RS12740 0.43 -2.9 2,658,430 + BWI76_RS12740 0.43 +0.8 2,658,430 + BWI76_RS12740 0.43 -1.7 2,658,430 + BWI76_RS12740 0.43 -0.2 2,658,436 - BWI76_RS12740 0.45 -1.7 2,658,438 - BWI76_RS12740 0.45 -1.6 2,658,438 - BWI76_RS12740 0.45 +0.7 2,658,438 - BWI76_RS12740 0.45 +1.0 2,658,438 - BWI76_RS12740 0.45 +0.7 2,658,438 - BWI76_RS12740 0.45 +0.3 2,658,478 - BWI76_RS12740 0.56 -0.6 2,658,548 + BWI76_RS12740 0.76 -0.8 2,658,556 - BWI76_RS12740 0.78 +2.3 2,658,619 + -1.7 2,658,631 + +1.8 2,658,638 + +0.8 2,658,646 - +0.6 2,658,689 - +0.3 2,658,696 + +3.4 2,658,704 - -1.5 2,658,708 + -0.1 2,658,714 - +1.8 2,658,714 - +0.3 2,658,716 - -0.5
Or see this region's nucleotide sequence