Experiment: KLEB13 MOI 0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS07815 and BWI76_RS07820 are separated by 127 nucleotides BWI76_RS07820 and BWI76_RS07825 are separated by 102 nucleotides
BWI76_RS07815: BWI76_RS07815 - hypothetical protein, at 1,656,575 to 1,657,816
_RS07815
BWI76_RS07820: BWI76_RS07820 - S-methyl-5-thioribose kinase, at 1,657,944 to 1,659,143
_RS07820
BWI76_RS07825: BWI76_RS07825 - S-methyl-5-thioribose-1-phosphate isomerase, at 1,659,246 to 1,660,274
_RS07825
Position (kb)
1657
1658
1659
1660 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1657.029 kb on - strand, within BWI76_RS07815 at 1657.270 kb on - strand, within BWI76_RS07815 at 1657.318 kb on + strand, within BWI76_RS07815 at 1657.363 kb on - strand, within BWI76_RS07815 at 1657.724 kb on + strand at 1657.825 kb on + strand at 1658.006 kb on + strand at 1658.024 kb on + strand at 1658.800 kb on + strand, within BWI76_RS07820 at 1658.927 kb on - strand, within BWI76_RS07820 at 1659.263 kb on - strand at 1659.270 kb on - strand at 1659.276 kb on - strand at 1659.344 kb on + strand at 1659.450 kb on + strand, within BWI76_RS07825 at 1659.536 kb on - strand, within BWI76_RS07825 at 1659.831 kb on - strand, within BWI76_RS07825 at 1659.831 kb on - strand, within BWI76_RS07825 at 1659.831 kb on - strand, within BWI76_RS07825 at 1659.885 kb on - strand, within BWI76_RS07825 at 1659.920 kb on - strand, within BWI76_RS07825 at 1660.053 kb on - strand, within BWI76_RS07825 at 1660.136 kb on - strand, within BWI76_RS07825
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB13 MOI 0.1 remove 1,657,029 - BWI76_RS07815 0.37 +0.4 1,657,270 - BWI76_RS07815 0.56 +0.1 1,657,318 + BWI76_RS07815 0.60 -1.3 1,657,363 - BWI76_RS07815 0.63 +0.5 1,657,724 + -0.6 1,657,825 + +0.6 1,658,006 + -0.9 1,658,024 + -0.8 1,658,800 + BWI76_RS07820 0.71 -1.2 1,658,927 - BWI76_RS07820 0.82 -1.2 1,659,263 - -0.1 1,659,270 - +0.7 1,659,276 - +0.6 1,659,344 + -2.8 1,659,450 + BWI76_RS07825 0.20 -1.0 1,659,536 - BWI76_RS07825 0.28 +0.3 1,659,831 - BWI76_RS07825 0.57 -1.7 1,659,831 - BWI76_RS07825 0.57 +0.1 1,659,831 - BWI76_RS07825 0.57 +2.2 1,659,885 - BWI76_RS07825 0.62 +0.1 1,659,920 - BWI76_RS07825 0.66 +0.2 1,660,053 - BWI76_RS07825 0.78 +2.6 1,660,136 - BWI76_RS07825 0.86 +0.2
Or see this region's nucleotide sequence