Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt LRK55_RS19045 and LRK55_RS19050 are separated by 414 nucleotides LRK55_RS19050 and LRK55_RS19055 are separated by 69 nucleotides
LRK55_RS19045: LRK55_RS19045 - DNA-binding protein, at 146,887 to 147,825
_RS19045
LRK55_RS19050: LRK55_RS19050 - hypothetical protein, at 148,240 to 148,452
_RS19050
LRK55_RS19055: LRK55_RS19055 - hypothetical protein, at 148,522 to 150,288
_RS19055
Position (kb) 148
149 Strain fitness (log2 ratio) -2
-1
0
1 at 147.315 kb on + strand, within LRK55_RS19045 at 147.390 kb on + strand, within LRK55_RS19045 at 147.412 kb on + strand, within LRK55_RS19045 at 147.412 kb on + strand, within LRK55_RS19045 at 147.413 kb on - strand, within LRK55_RS19045 at 147.413 kb on - strand, within LRK55_RS19045 at 147.413 kb on - strand, within LRK55_RS19045 at 147.413 kb on - strand, within LRK55_RS19045 at 147.413 kb on - strand, within LRK55_RS19045 at 147.413 kb on - strand, within LRK55_RS19045 at 147.413 kb on - strand, within LRK55_RS19045 at 147.413 kb on - strand, within LRK55_RS19045 at 147.413 kb on - strand, within LRK55_RS19045 at 147.878 kb on + strand at 147.878 kb on + strand at 147.878 kb on + strand at 147.879 kb on - strand at 147.879 kb on - strand at 147.879 kb on - strand at 147.879 kb on - strand at 147.924 kb on - strand at 147.924 kb on - strand at 147.924 kb on - strand at 148.046 kb on + strand at 148.046 kb on + strand at 148.046 kb on + strand at 148.046 kb on + strand at 148.046 kb on + strand at 148.047 kb on - strand at 148.047 kb on - strand at 148.186 kb on + strand at 148.186 kb on + strand at 148.186 kb on + strand at 148.187 kb on - strand at 148.187 kb on - strand at 148.187 kb on - strand at 148.187 kb on - strand at 148.315 kb on + strand, within LRK55_RS19050 at 148.316 kb on - strand, within LRK55_RS19050 at 148.316 kb on - strand, within LRK55_RS19050 at 148.427 kb on + strand, within LRK55_RS19050 at 148.478 kb on + strand at 148.479 kb on - strand at 148.479 kb on - strand at 148.533 kb on + strand at 148.533 kb on + strand at 148.533 kb on + strand at 148.533 kb on + strand at 148.533 kb on + strand at 148.534 kb on - strand at 148.534 kb on - strand at 148.534 kb on - strand at 148.534 kb on - strand at 148.534 kb on - strand at 148.563 kb on + strand at 148.576 kb on + strand at 148.576 kb on + strand at 148.576 kb on + strand at 148.576 kb on + strand at 148.576 kb on + strand at 148.576 kb on + strand at 148.576 kb on + strand at 148.577 kb on - strand at 148.577 kb on - strand at 148.577 kb on - strand at 148.598 kb on + strand at 148.598 kb on + strand at 148.598 kb on + strand at 148.598 kb on + strand at 148.598 kb on + strand at 148.598 kb on + strand at 148.598 kb on + strand at 148.599 kb on - strand at 148.599 kb on - strand at 148.677 kb on - strand at 148.677 kb on - strand at 148.677 kb on - strand at 148.677 kb on - strand at 148.677 kb on - strand at 148.689 kb on - strand at 148.746 kb on - strand, within LRK55_RS19055 at 148.746 kb on - strand, within LRK55_RS19055 at 148.746 kb on - strand, within LRK55_RS19055 at 148.746 kb on - strand, within LRK55_RS19055 at 148.746 kb on - strand, within LRK55_RS19055 at 148.814 kb on + strand, within LRK55_RS19055 at 148.825 kb on + strand, within LRK55_RS19055 at 148.856 kb on - strand, within LRK55_RS19055 at 148.856 kb on - strand, within LRK55_RS19055 at 148.856 kb on - strand, within LRK55_RS19055 at 148.856 kb on - strand, within LRK55_RS19055 at 148.856 kb on - strand, within LRK55_RS19055 at 148.856 kb on - strand, within LRK55_RS19055 at 148.856 kb on - strand, within LRK55_RS19055 at 148.856 kb on - strand, within LRK55_RS19055 at 148.856 kb on - strand, within LRK55_RS19055 at 148.856 kb on - strand, within LRK55_RS19055 at 148.856 kb on - strand, within LRK55_RS19055 at 148.856 kb on - strand, within LRK55_RS19055 at 148.856 kb on - strand, within LRK55_RS19055 at 148.856 kb on - strand, within LRK55_RS19055 at 148.856 kb on - strand, within LRK55_RS19055 at 148.856 kb on - strand, within LRK55_RS19055 at 148.856 kb on - strand, within LRK55_RS19055 at 148.856 kb on - strand, within LRK55_RS19055 at 148.856 kb on - strand, within LRK55_RS19055 at 148.856 kb on - strand, within LRK55_RS19055 at 149.119 kb on + strand, within LRK55_RS19055 at 149.119 kb on + strand, within LRK55_RS19055 at 149.120 kb on - strand, within LRK55_RS19055 at 149.244 kb on + strand, within LRK55_RS19055 at 149.244 kb on + strand, within LRK55_RS19055 at 149.245 kb on - strand, within LRK55_RS19055 at 149.405 kb on + strand, within LRK55_RS19055 at 149.405 kb on + strand, within LRK55_RS19055 at 149.406 kb on - strand, within LRK55_RS19055 at 149.406 kb on - strand, within LRK55_RS19055
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 147,315 + LRK55_RS19045 0.46 +1.4 147,390 + LRK55_RS19045 0.54 -0.7 147,412 + LRK55_RS19045 0.56 -0.3 147,412 + LRK55_RS19045 0.56 +0.8 147,413 - LRK55_RS19045 0.56 +0.0 147,413 - LRK55_RS19045 0.56 +0.3 147,413 - LRK55_RS19045 0.56 -0.1 147,413 - LRK55_RS19045 0.56 -0.6 147,413 - LRK55_RS19045 0.56 -0.4 147,413 - LRK55_RS19045 0.56 -1.0 147,413 - LRK55_RS19045 0.56 +0.5 147,413 - LRK55_RS19045 0.56 -0.7 147,413 - LRK55_RS19045 0.56 +0.3 147,878 + -0.4 147,878 + +1.1 147,878 + +1.5 147,879 - +0.9 147,879 - +0.3 147,879 - +0.0 147,879 - +0.5 147,924 - -0.5 147,924 - +0.6 147,924 - -0.8 148,046 + -0.3 148,046 + +0.8 148,046 + -0.4 148,046 + +0.3 148,046 + +0.0 148,047 - -1.0 148,047 - -0.4 148,186 + +0.3 148,186 + +0.4 148,186 + +0.0 148,187 - +0.3 148,187 - -0.7 148,187 - +0.1 148,187 - -0.7 148,315 + LRK55_RS19050 0.35 -0.2 148,316 - LRK55_RS19050 0.36 -1.6 148,316 - LRK55_RS19050 0.36 -0.3 148,427 + LRK55_RS19050 0.88 -1.0 148,478 + +0.7 148,479 - +0.0 148,479 - -1.1 148,533 + +0.3 148,533 + -0.2 148,533 + +0.4 148,533 + -0.4 148,533 + -0.1 148,534 - +0.7 148,534 - +0.7 148,534 - -0.6 148,534 - +0.2 148,534 - +0.2 148,563 + -0.5 148,576 + +0.3 148,576 + +1.2 148,576 + +0.4 148,576 + -0.3 148,576 + +0.6 148,576 + -1.0 148,576 + +0.8 148,577 - +0.0 148,577 - +0.0 148,577 - -0.3 148,598 + -0.3 148,598 + -0.4 148,598 + -0.4 148,598 + -0.0 148,598 + -0.3 148,598 + +1.0 148,598 + -0.8 148,599 - -0.6 148,599 - -0.4 148,677 - -0.2 148,677 - -0.3 148,677 - -0.5 148,677 - +0.1 148,677 - -0.6 148,689 - +0.7 148,746 - LRK55_RS19055 0.13 -0.8 148,746 - LRK55_RS19055 0.13 -1.3 148,746 - LRK55_RS19055 0.13 -0.8 148,746 - LRK55_RS19055 0.13 -0.8 148,746 - LRK55_RS19055 0.13 +0.9 148,814 + LRK55_RS19055 0.17 -0.9 148,825 + LRK55_RS19055 0.17 +0.6 148,856 - LRK55_RS19055 0.19 +0.2 148,856 - LRK55_RS19055 0.19 +1.2 148,856 - LRK55_RS19055 0.19 +0.4 148,856 - LRK55_RS19055 0.19 +0.5 148,856 - LRK55_RS19055 0.19 +0.3 148,856 - LRK55_RS19055 0.19 +0.5 148,856 - LRK55_RS19055 0.19 -0.3 148,856 - LRK55_RS19055 0.19 +0.1 148,856 - LRK55_RS19055 0.19 +0.8 148,856 - LRK55_RS19055 0.19 +0.2 148,856 - LRK55_RS19055 0.19 +0.2 148,856 - LRK55_RS19055 0.19 +1.1 148,856 - LRK55_RS19055 0.19 -0.7 148,856 - LRK55_RS19055 0.19 +0.4 148,856 - LRK55_RS19055 0.19 -2.1 148,856 - LRK55_RS19055 0.19 +0.2 148,856 - LRK55_RS19055 0.19 -0.6 148,856 - LRK55_RS19055 0.19 -1.6 148,856 - LRK55_RS19055 0.19 +0.6 148,856 - LRK55_RS19055 0.19 +0.3 149,119 + LRK55_RS19055 0.34 -1.3 149,119 + LRK55_RS19055 0.34 +0.5 149,120 - LRK55_RS19055 0.34 +0.7 149,244 + LRK55_RS19055 0.41 +0.6 149,244 + LRK55_RS19055 0.41 +0.1 149,245 - LRK55_RS19055 0.41 +0.2 149,405 + LRK55_RS19055 0.50 +0.4 149,405 + LRK55_RS19055 0.50 -0.1 149,406 - LRK55_RS19055 0.50 -0.8 149,406 - LRK55_RS19055 0.50 +0.0
Or see this region's nucleotide sequence