Strain Fitness in Rhodanobacter denitrificans MT42 around LRK55_RS09800

Experiment: no stress control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	no stress control
2,145,215	+				-2.8
2,145,224	+				+0.4
2,145,224	+				-0.0
2,145,224	+				-0.2
2,145,224	+				+0.9
2,145,224	+				+0.3
2,145,224	+				+0.2
2,145,224	+				-0.6
2,145,224	+				+1.5
2,145,224	+				-1.4
2,145,224	+				+0.4
2,145,224	+				-1.6
2,145,224	+				+0.6
2,145,224	+				+0.8
2,145,224	+				+1.2
2,145,225	-				+1.0
2,145,225	-				+0.9
2,145,225	-				+1.2
2,145,225	-				-2.0
2,145,225	-				+0.2
2,145,225	-				-0.0
2,145,225	-				+0.7
2,145,225	-				-0.2
2,145,225	-				+0.2
2,145,225	-				+0.8
2,145,225	-				+0.6
2,145,512	+		LRK55_RS09800	0.22	-0.1
2,145,512	+		LRK55_RS09800	0.22	+0.3
2,145,512	+		LRK55_RS09800	0.22	+0.4
2,145,512	+		LRK55_RS09800	0.22	-1.0
2,145,512	+		LRK55_RS09800	0.22	+0.1
2,145,512	+		LRK55_RS09800	0.22	+0.2
2,145,512	+		LRK55_RS09800	0.22	+0.3
2,145,512	+		LRK55_RS09800	0.22	+0.0
2,145,513	-		LRK55_RS09800	0.22	+0.2
2,145,513	-		LRK55_RS09800	0.22	-0.3
2,145,513	-		LRK55_RS09800	0.22	-0.2
2,145,582	+		LRK55_RS09800	0.27	-0.3
2,145,582	+		LRK55_RS09800	0.27	-0.0
2,145,647	+		LRK55_RS09800	0.32	-1.6
2,145,647	+		LRK55_RS09800	0.32	+0.6
2,145,647	+		LRK55_RS09800	0.32	+0.6
2,145,648	-		LRK55_RS09800	0.32	-1.9
2,145,648	-		LRK55_RS09800	0.32	+0.5
2,145,648	-		LRK55_RS09800	0.32	-0.7
2,145,649	+		LRK55_RS09800	0.32	+0.9
2,145,649	+		LRK55_RS09800	0.32	+0.2
2,145,649	+		LRK55_RS09800	0.32	-0.6
2,145,649	+		LRK55_RS09800	0.32	-1.0
2,145,649	+		LRK55_RS09800	0.32	-0.4
2,145,649	+		LRK55_RS09800	0.32	+0.3
2,145,649	+		LRK55_RS09800	0.32	+0.3
2,145,649	+		LRK55_RS09800	0.32	-0.3
2,145,649	+		LRK55_RS09800	0.32	-0.3
2,145,650	-		LRK55_RS09800	0.32	-0.1
2,145,650	-		LRK55_RS09800	0.32	-0.1
2,145,650	-		LRK55_RS09800	0.32	-0.9
2,145,650	-		LRK55_RS09800	0.32	+0.4
2,145,650	-		LRK55_RS09800	0.32	-0.1
2,145,650	-		LRK55_RS09800	0.32	-0.5
2,145,650	-		LRK55_RS09800	0.32	+0.9
2,145,794	+		LRK55_RS09800	0.43	-0.1
2,145,794	+		LRK55_RS09800	0.43	-1.2
2,145,794	+		LRK55_RS09800	0.43	+0.1
2,145,794	+		LRK55_RS09800	0.43	+0.1
2,145,794	+		LRK55_RS09800	0.43	+0.3
2,145,794	+		LRK55_RS09800	0.43	+0.3
2,145,794	+		LRK55_RS09800	0.43	-1.5
2,145,794	+		LRK55_RS09800	0.43	+0.6
2,145,794	+		LRK55_RS09800	0.43	+0.2
2,145,794	+		LRK55_RS09800	0.43	+1.4
2,145,794	+		LRK55_RS09800	0.43	+0.6
2,145,794	+		LRK55_RS09800	0.43	-0.8
2,145,794	+		LRK55_RS09800	0.43	+0.9
2,145,794	+		LRK55_RS09800	0.43	+0.2
2,145,794	+		LRK55_RS09800	0.43	-0.7
2,145,794	+		LRK55_RS09800	0.43	+2.2
2,145,794	+		LRK55_RS09800	0.43	-0.5
2,145,794	+		LRK55_RS09800	0.43	-2.3
2,145,794	+		LRK55_RS09800	0.43	+1.7
2,145,794	+		LRK55_RS09800	0.43	-0.2
2,145,794	+		LRK55_RS09800	0.43	+0.0
2,145,795	-		LRK55_RS09800	0.43	-0.6
2,145,795	-		LRK55_RS09800	0.43	-3.5
2,145,795	-		LRK55_RS09800	0.43	+1.0
2,145,795	-		LRK55_RS09800	0.43	-0.4
2,145,795	-		LRK55_RS09800	0.43	-0.7
2,145,795	-		LRK55_RS09800	0.43	+1.3
2,145,795	-		LRK55_RS09800	0.43	-0.3
2,145,795	-		LRK55_RS09800	0.43	+1.0
2,145,795	-		LRK55_RS09800	0.43	-0.2
2,145,795	-		LRK55_RS09800	0.43	-1.5
2,145,795	-		LRK55_RS09800	0.43	-0.9
2,145,795	-		LRK55_RS09800	0.43	+0.1
2,145,795	-		LRK55_RS09800	0.43	+0.6
2,145,795	-		LRK55_RS09800	0.43	+1.5
2,145,795	-		LRK55_RS09800	0.43	-0.5
2,145,795	-		LRK55_RS09800	0.43	-1.6
2,146,130	+		LRK55_RS09800	0.67	-1.7
2,146,130	+		LRK55_RS09800	0.67	+0.0
2,146,130	+		LRK55_RS09800	0.67	+1.4
2,146,131	-		LRK55_RS09800	0.67	-0.1
2,146,131	-		LRK55_RS09800	0.67	+0.8
2,146,131	-		LRK55_RS09800	0.67	-1.3
2,146,131	-		LRK55_RS09800	0.67	+0.2
2,146,131	-		LRK55_RS09800	0.67	-0.1
2,146,131	-		LRK55_RS09800	0.67	-0.0
2,146,440	+		LRK55_RS09800	0.90	+1.6
2,146,641	+				-0.9
2,146,642	-				+1.2
2,146,642	-				+0.5
2,147,052	+		LRK55_RS09805	0.28	-2.5
2,147,052	+		LRK55_RS09805	0.28	-0.6
2,147,052	+		LRK55_RS09805	0.28	+0.2
2,147,052	+		LRK55_RS09805	0.28	-0.1
2,147,053	-		LRK55_RS09805	0.28	+0.2
2,147,053	-		LRK55_RS09805	0.28	-1.6
2,147,053	-		LRK55_RS09805	0.28	-0.1
2,147,088	+		LRK55_RS09805	0.31	-1.1
2,147,088	+		LRK55_RS09805	0.31	-0.1
2,147,088	+		LRK55_RS09805	0.31	-2.5
2,147,089	-		LRK55_RS09805	0.31	-0.3
2,147,089	-		LRK55_RS09805	0.31	-1.1
2,147,089	-		LRK55_RS09805	0.31	+0.4
2,147,089	-		LRK55_RS09805	0.31	-0.7
2,147,089	-		LRK55_RS09805	0.31	-0.8
2,147,089	-		LRK55_RS09805	0.31	-1.0
2,147,089	-		LRK55_RS09805	0.31	-1.1
2,147,292	+		LRK55_RS09805	0.46	-0.2
2,147,292	+		LRK55_RS09805	0.46	-1.1
2,147,292	+		LRK55_RS09805	0.46	-0.2
2,147,292	+		LRK55_RS09805	0.46	-0.5
2,147,292	+		LRK55_RS09805	0.46	-1.1
2,147,292	+		LRK55_RS09805	0.46	-2.6
2,147,292	+		LRK55_RS09805	0.46	-0.2
2,147,292	+		LRK55_RS09805	0.46	-0.1
2,147,293	-		LRK55_RS09805	0.46	+0.4
2,147,293	-		LRK55_RS09805	0.46	-1.4
2,147,293	-		LRK55_RS09805	0.46	+0.5
2,147,293	-		LRK55_RS09805	0.46	-0.8
2,147,293	-		LRK55_RS09805	0.46	-1.6
2,147,293	-		LRK55_RS09805	0.46	-0.6
2,147,293	-		LRK55_RS09805	0.46	-0.4
2,147,293	-		LRK55_RS09805	0.46	-0.6
2,147,293	-		LRK55_RS09805	0.46	-2.3
2,147,293	-		LRK55_RS09805	0.46	+1.8
2,147,293	-		LRK55_RS09805	0.46	-3.5
2,147,400	+		LRK55_RS09805	0.55	-2.0
2,147,400	+		LRK55_RS09805	0.55	-1.5
2,147,401	-		LRK55_RS09805	0.55	-1.9
2,147,401	-		LRK55_RS09805	0.55	-0.4
2,147,401	-		LRK55_RS09805	0.55	-0.8
2,147,401	-		LRK55_RS09805	0.55	-0.8
2,147,401	-		LRK55_RS09805	0.55	-3.4
2,147,401	-		LRK55_RS09805	0.55	+0.4
2,147,514	+		LRK55_RS09805	0.64	-1.5
2,147,514	+		LRK55_RS09805	0.64	-0.8
2,147,514	+		LRK55_RS09805	0.64	-1.7
2,147,515	-		LRK55_RS09805	0.64	-2.8
2,147,515	-		LRK55_RS09805	0.64	-0.8
2,147,515	-		LRK55_RS09805	0.64	+1.5