Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt LRK55_RS02175 and LRK55_RS02180 are separated by 190 nucleotides LRK55_RS02180 and LRK55_RS02185 are separated by 119 nucleotides LRK55_RS02185 and LRK55_RS02190 are separated by 304 nucleotides
LRK55_RS02175: LRK55_RS02175 - glycine zipper 2TM domain-containing protein, at 475,680 to 476,207
_RS02175
LRK55_RS02180: LRK55_RS02180 - cysteine--tRNA ligase, at 476,398 to 477,768
_RS02180
LRK55_RS02185: LRK55_RS02185 - SufE family protein, at 477,888 to 478,322
_RS02185
LRK55_RS02190: LRK55_RS02190 - TonB-dependent siderophore receptor, at 478,627 to 480,726
_RS02190
Position (kb)
476
477
478 Strain fitness (log2 ratio)
-1
0
1
2 at 475.531 kb on + strand at 475.532 kb on - strand at 475.532 kb on - strand at 475.532 kb on - strand at 475.543 kb on - strand at 475.544 kb on + strand at 475.544 kb on + strand at 475.544 kb on + strand at 475.544 kb on + strand at 475.544 kb on + strand at 475.545 kb on - strand at 475.545 kb on - strand at 475.545 kb on - strand at 475.545 kb on - strand at 475.545 kb on - strand at 475.545 kb on - strand at 475.545 kb on - strand at 475.545 kb on - strand at 475.545 kb on - strand at 476.251 kb on - strand at 476.283 kb on - strand at 476.290 kb on + strand at 476.290 kb on + strand at 476.290 kb on + strand at 476.290 kb on + strand at 476.290 kb on + strand at 476.290 kb on + strand at 476.290 kb on + strand at 476.290 kb on + strand at 476.291 kb on - strand at 476.291 kb on - strand at 476.291 kb on - strand at 476.291 kb on - strand at 476.291 kb on - strand at 476.291 kb on - strand at 476.291 kb on - strand at 476.291 kb on - strand at 476.291 kb on - strand at 476.291 kb on - strand at 476.291 kb on - strand at 476.291 kb on - strand at 476.330 kb on + strand at 476.330 kb on + strand at 476.331 kb on - strand at 476.331 kb on - strand at 476.340 kb on + strand at 476.340 kb on + strand at 476.340 kb on + strand at 476.340 kb on + strand at 476.340 kb on + strand at 476.340 kb on + strand at 476.341 kb on - strand at 477.792 kb on + strand at 477.792 kb on + strand at 477.793 kb on - strand at 478.374 kb on + strand at 478.374 kb on + strand at 478.374 kb on + strand at 478.374 kb on + strand at 478.375 kb on - strand at 478.453 kb on + strand at 478.454 kb on - strand at 478.454 kb on - strand at 478.759 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 475,531 + +0.6 475,532 - -0.8 475,532 - -0.5 475,532 - -0.8 475,543 - +0.1 475,544 + -0.6 475,544 + +0.6 475,544 + -0.0 475,544 + +0.4 475,544 + -0.7 475,545 - +1.1 475,545 - -0.0 475,545 - -0.7 475,545 - -0.1 475,545 - +2.1 475,545 - +0.6 475,545 - +0.2 475,545 - +1.2 475,545 - -0.5 476,251 - -0.9 476,283 - -1.7 476,290 + +0.1 476,290 + +0.3 476,290 + -0.7 476,290 + -1.6 476,290 + -1.2 476,290 + +0.4 476,290 + -0.6 476,290 + +0.7 476,291 - +0.4 476,291 - -0.4 476,291 - +2.2 476,291 - +0.3 476,291 - +0.1 476,291 - +0.1 476,291 - -0.1 476,291 - +0.1 476,291 - +0.9 476,291 - -0.5 476,291 - -0.3 476,291 - +2.2 476,330 + +0.5 476,330 + -0.4 476,331 - +0.7 476,331 - +0.1 476,340 + +0.6 476,340 + +1.1 476,340 + +0.8 476,340 + -1.5 476,340 + +0.4 476,340 + -0.2 476,341 - -1.3 477,792 + -1.7 477,792 + -0.5 477,793 - -0.7 478,374 + -0.3 478,374 + -0.1 478,374 + -1.3 478,374 + +0.8 478,375 - +0.6 478,453 + -1.6 478,454 - -1.5 478,454 - +1.1 478,759 + +0.1
Or see this region's nucleotide sequence