Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt LRK55_RS02020 and LRK55_RS02025 overlap by 4 nucleotides LRK55_RS02025 and LRK55_RS02030 are separated by 120 nucleotides
LRK55_RS02020: LRK55_RS02020 - ferrous iron transporter B, at 444,046 to 445,881
_RS02020
LRK55_RS02025: LRK55_RS02025 - FeoA family protein, at 445,878 to 446,123
_RS02025
LRK55_RS02030: LRK55_RS02030 - enoyl-CoA hydratase-related protein, at 446,244 to 447,041
_RS02030
Position (kb) 445
446
447 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 445.166 kb on + strand, within LRK55_RS02020 at 445.166 kb on + strand, within LRK55_RS02020 at 445.166 kb on + strand, within LRK55_RS02020 at 445.166 kb on + strand, within LRK55_RS02020 at 445.166 kb on + strand, within LRK55_RS02020 at 445.166 kb on + strand, within LRK55_RS02020 at 445.166 kb on + strand, within LRK55_RS02020 at 445.166 kb on + strand, within LRK55_RS02020 at 445.166 kb on + strand, within LRK55_RS02020 at 445.166 kb on + strand, within LRK55_RS02020 at 445.166 kb on + strand, within LRK55_RS02020 at 445.167 kb on - strand, within LRK55_RS02020 at 445.167 kb on - strand, within LRK55_RS02020 at 445.167 kb on - strand, within LRK55_RS02020 at 445.167 kb on - strand, within LRK55_RS02020 at 445.167 kb on - strand, within LRK55_RS02020 at 445.167 kb on - strand, within LRK55_RS02020 at 445.167 kb on - strand, within LRK55_RS02020 at 445.167 kb on - strand, within LRK55_RS02020 at 445.167 kb on - strand, within LRK55_RS02020 at 445.167 kb on - strand, within LRK55_RS02020 at 445.167 kb on - strand, within LRK55_RS02020 at 445.167 kb on - strand, within LRK55_RS02020 at 445.424 kb on - strand, within LRK55_RS02020 at 445.424 kb on - strand, within LRK55_RS02020 at 445.631 kb on + strand, within LRK55_RS02020 at 445.631 kb on + strand, within LRK55_RS02020 at 445.631 kb on + strand, within LRK55_RS02020 at 445.631 kb on + strand, within LRK55_RS02020 at 445.691 kb on + strand, within LRK55_RS02020 at 445.692 kb on - strand, within LRK55_RS02020 at 445.778 kb on + strand at 445.778 kb on + strand at 445.778 kb on + strand at 445.778 kb on + strand at 445.778 kb on + strand at 445.778 kb on + strand at 445.778 kb on + strand at 445.779 kb on - strand at 445.779 kb on - strand at 445.779 kb on - strand at 445.779 kb on - strand at 445.779 kb on - strand at 445.779 kb on - strand at 446.001 kb on + strand, within LRK55_RS02025 at 446.002 kb on - strand, within LRK55_RS02025 at 446.140 kb on + strand at 446.140 kb on + strand at 446.140 kb on + strand at 446.141 kb on - strand at 446.146 kb on + strand at 446.147 kb on - strand at 446.147 kb on - strand at 446.147 kb on - strand at 446.147 kb on - strand at 446.147 kb on - strand at 446.158 kb on + strand at 446.159 kb on - strand at 446.159 kb on - strand at 446.213 kb on - strand at 446.223 kb on + strand at 446.223 kb on + strand at 446.223 kb on + strand at 446.224 kb on - strand at 446.251 kb on - strand at 446.685 kb on + strand, within LRK55_RS02030 at 446.685 kb on + strand, within LRK55_RS02030 at 447.039 kb on + strand at 447.039 kb on + strand at 447.039 kb on + strand at 447.039 kb on + strand at 447.039 kb on + strand at 447.039 kb on + strand at 447.039 kb on + strand at 447.039 kb on + strand at 447.039 kb on + strand at 447.039 kb on + strand at 447.039 kb on + strand at 447.039 kb on + strand at 447.039 kb on + strand at 447.039 kb on + strand at 447.039 kb on + strand at 447.039 kb on + strand at 447.039 kb on + strand at 447.040 kb on - strand at 447.040 kb on - strand at 447.040 kb on - strand at 447.040 kb on - strand at 447.040 kb on - strand at 447.040 kb on - strand at 447.040 kb on - strand at 447.040 kb on - strand at 447.040 kb on - strand at 447.040 kb on - strand at 447.040 kb on - strand at 447.040 kb on - strand at 447.040 kb on - strand at 447.040 kb on - strand at 447.088 kb on + strand at 447.089 kb on - strand at 447.089 kb on - strand at 447.097 kb on + strand at 447.097 kb on + strand at 447.097 kb on + strand at 447.097 kb on + strand at 447.097 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 445,166 + LRK55_RS02020 0.61 -0.6 445,166 + LRK55_RS02020 0.61 +0.5 445,166 + LRK55_RS02020 0.61 -0.5 445,166 + LRK55_RS02020 0.61 +1.0 445,166 + LRK55_RS02020 0.61 +0.4 445,166 + LRK55_RS02020 0.61 -0.3 445,166 + LRK55_RS02020 0.61 -1.3 445,166 + LRK55_RS02020 0.61 -0.3 445,166 + LRK55_RS02020 0.61 +0.6 445,166 + LRK55_RS02020 0.61 -1.1 445,166 + LRK55_RS02020 0.61 -0.3 445,167 - LRK55_RS02020 0.61 +0.2 445,167 - LRK55_RS02020 0.61 +0.5 445,167 - LRK55_RS02020 0.61 -0.6 445,167 - LRK55_RS02020 0.61 -0.1 445,167 - LRK55_RS02020 0.61 -0.4 445,167 - LRK55_RS02020 0.61 +0.9 445,167 - LRK55_RS02020 0.61 +0.8 445,167 - LRK55_RS02020 0.61 -1.3 445,167 - LRK55_RS02020 0.61 -0.1 445,167 - LRK55_RS02020 0.61 -0.3 445,167 - LRK55_RS02020 0.61 -1.3 445,167 - LRK55_RS02020 0.61 -0.4 445,424 - LRK55_RS02020 0.75 -0.6 445,424 - LRK55_RS02020 0.75 -0.5 445,631 + LRK55_RS02020 0.86 +0.5 445,631 + LRK55_RS02020 0.86 -0.1 445,631 + LRK55_RS02020 0.86 -1.5 445,631 + LRK55_RS02020 0.86 -1.4 445,691 + LRK55_RS02020 0.90 +0.2 445,692 - LRK55_RS02020 0.90 +0.8 445,778 + +0.1 445,778 + -0.8 445,778 + +1.2 445,778 + -2.4 445,778 + +0.1 445,778 + +0.4 445,778 + -0.2 445,779 - +1.2 445,779 - -0.0 445,779 - -0.1 445,779 - -0.5 445,779 - -0.3 445,779 - -0.1 446,001 + LRK55_RS02025 0.50 +0.2 446,002 - LRK55_RS02025 0.50 +0.1 446,140 + -0.8 446,140 + -1.1 446,140 + -0.1 446,141 - -0.2 446,146 + +0.4 446,147 - -0.4 446,147 - +0.5 446,147 - -0.3 446,147 - -0.1 446,147 - -0.2 446,158 + -0.6 446,159 - +0.2 446,159 - +0.6 446,213 - +0.3 446,223 + -1.2 446,223 + +0.3 446,223 + -0.1 446,224 - +1.0 446,251 - -2.1 446,685 + LRK55_RS02030 0.55 -0.9 446,685 + LRK55_RS02030 0.55 -3.3 447,039 + +0.1 447,039 + +0.1 447,039 + -0.2 447,039 + +0.5 447,039 + -1.1 447,039 + -0.4 447,039 + -0.8 447,039 + -0.7 447,039 + +0.3 447,039 + -0.4 447,039 + +0.2 447,039 + +1.1 447,039 + +0.3 447,039 + -0.4 447,039 + -0.0 447,039 + +0.9 447,039 + +0.6 447,040 - -1.4 447,040 - +2.1 447,040 - -0.7 447,040 - +0.1 447,040 - -1.6 447,040 - -1.9 447,040 - +0.6 447,040 - -0.9 447,040 - +0.3 447,040 - -0.9 447,040 - -0.6 447,040 - -0.3 447,040 - -0.0 447,040 - -1.0 447,088 + -0.5 447,089 - +0.2 447,089 - +0.7 447,097 + -0.7 447,097 + -0.1 447,097 + -0.2 447,097 + +0.4 447,097 + -0.5
Or see this region's nucleotide sequence