Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt LRK55_RS00955 and LRK55_RS00960 are separated by 196 nucleotides LRK55_RS00960 and LRK55_RS00965 are separated by 35 nucleotides LRK55_RS00965 and LRK55_RS00970 are separated by 145 nucleotides
LRK55_RS00955: LRK55_RS00955 - acyl carrier protein, at 213,201 to 213,440
_RS00955
LRK55_RS00960: LRK55_RS00960 - 3-oxoacyl-ACP reductase FabG, at 213,637 to 214,380
_RS00960
LRK55_RS00965: LRK55_RS00965 - ACP S-malonyltransferase, at 214,416 to 215,363
_RS00965
LRK55_RS00970: LRK55_RS00970 - beta-ketoacyl-ACP synthase III, at 215,509 to 216,483
_RS00970
Position (kb)
214
215
216 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 213.465 kb on - strand at 213.514 kb on - strand at 213.514 kb on - strand at 213.514 kb on - strand at 213.514 kb on - strand at 213.514 kb on - strand at 213.514 kb on - strand at 213.514 kb on - strand at 213.514 kb on - strand at 213.521 kb on - strand at 213.638 kb on + strand at 213.648 kb on - strand at 213.648 kb on - strand at 213.648 kb on - strand at 213.648 kb on - strand at 213.648 kb on - strand at 213.648 kb on - strand at 213.648 kb on - strand at 213.648 kb on - strand at 213.648 kb on - strand at 213.648 kb on - strand at 213.648 kb on - strand at 213.648 kb on - strand at 213.648 kb on - strand at 213.648 kb on - strand at 213.648 kb on - strand at 213.648 kb on - strand at 213.648 kb on - strand at 213.648 kb on - strand at 213.648 kb on - strand at 213.648 kb on - strand at 213.648 kb on - strand at 213.648 kb on - strand at 213.648 kb on - strand at 213.648 kb on - strand at 213.648 kb on - strand at 213.648 kb on - strand at 213.648 kb on - strand at 213.648 kb on - strand at 213.648 kb on - strand at 213.648 kb on - strand at 213.648 kb on - strand at 213.648 kb on - strand at 213.648 kb on - strand at 213.648 kb on - strand at 213.648 kb on - strand at 215.419 kb on - strand at 215.419 kb on - strand at 215.428 kb on + strand at 215.428 kb on + strand at 215.428 kb on + strand at 215.428 kb on + strand at 215.428 kb on + strand at 215.428 kb on + strand at 215.429 kb on - strand at 215.429 kb on - strand at 215.429 kb on - strand at 215.429 kb on - strand at 215.429 kb on - strand at 215.429 kb on - strand at 215.429 kb on - strand at 215.429 kb on - strand at 215.429 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 213,465 - -1.4 213,514 - -0.6 213,514 - -0.9 213,514 - +0.6 213,514 - +0.2 213,514 - -0.9 213,514 - +1.0 213,514 - +0.6 213,514 - +1.2 213,521 - +0.1 213,638 + -0.8 213,648 - -0.5 213,648 - -0.2 213,648 - +1.6 213,648 - +0.1 213,648 - -0.2 213,648 - -2.2 213,648 - -0.2 213,648 - +0.2 213,648 - -0.4 213,648 - +0.5 213,648 - -3.1 213,648 - -1.3 213,648 - -0.7 213,648 - +0.9 213,648 - -1.1 213,648 - +0.2 213,648 - +1.4 213,648 - -0.3 213,648 - +0.2 213,648 - -0.2 213,648 - -0.7 213,648 - -1.8 213,648 - -0.6 213,648 - +0.2 213,648 - -1.8 213,648 - -1.2 213,648 - -1.2 213,648 - -0.2 213,648 - -1.6 213,648 - -1.6 213,648 - -1.2 213,648 - +1.0 213,648 - -1.4 213,648 - -0.2 213,648 - +0.5 215,419 - +0.9 215,419 - +0.6 215,428 + +0.2 215,428 + +0.2 215,428 + +0.4 215,428 + -0.1 215,428 + -2.9 215,428 + -0.1 215,429 - +0.3 215,429 - +1.2 215,429 - -0.2 215,429 - -1.0 215,429 - +0.3 215,429 - -2.0 215,429 - -0.3 215,429 - -0.4 215,429 - -0.1
Or see this region's nucleotide sequence