Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt LRK55_RS02070 and LRK55_RS02075 are separated by 74 nucleotides LRK55_RS02075 and LRK55_RS02080 are separated by 198 nucleotides LRK55_RS02080 and LRK55_RS02085 are separated by 127 nucleotides LRK55_RS02085 and LRK55_RS02090 are separated by 83 nucleotides
LRK55_RS02070: LRK55_RS02070 - GNAT family N-acetyltransferase, at 453,849 to 454,412
_RS02070
LRK55_RS02075: LRK55_RS02075 - RcnB family protein, at 454,487 to 454,939
_RS02075
LRK55_RS02080: LRK55_RS02080 - SDR family oxidoreductase, at 455,138 to 455,905
_RS02080
LRK55_RS02085: LRK55_RS02085 - elongation factor P-like protein YeiP, at 456,033 to 456,596
_RS02085
LRK55_RS02090: LRK55_RS02090 - FUSC family protein, at 456,680 to 458,776
_RS02090
Position (kb) 455
456 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 454.143 kb on + strand, within LRK55_RS02070 at 454.144 kb on - strand, within LRK55_RS02070 at 454.144 kb on - strand, within LRK55_RS02070 at 454.281 kb on + strand, within LRK55_RS02070 at 454.281 kb on + strand, within LRK55_RS02070 at 454.281 kb on + strand, within LRK55_RS02070 at 454.282 kb on - strand, within LRK55_RS02070 at 454.282 kb on - strand, within LRK55_RS02070 at 454.282 kb on - strand, within LRK55_RS02070 at 454.282 kb on - strand, within LRK55_RS02070 at 454.382 kb on + strand at 454.383 kb on - strand at 454.488 kb on + strand at 454.488 kb on + strand at 454.489 kb on - strand at 454.489 kb on - strand at 454.543 kb on - strand, within LRK55_RS02075 at 454.543 kb on - strand, within LRK55_RS02075 at 454.599 kb on + strand, within LRK55_RS02075 at 454.599 kb on + strand, within LRK55_RS02075 at 454.599 kb on + strand, within LRK55_RS02075 at 454.599 kb on + strand, within LRK55_RS02075 at 454.599 kb on + strand, within LRK55_RS02075 at 454.599 kb on + strand, within LRK55_RS02075 at 454.600 kb on - strand, within LRK55_RS02075 at 454.600 kb on - strand, within LRK55_RS02075 at 454.623 kb on + strand, within LRK55_RS02075 at 454.623 kb on + strand, within LRK55_RS02075 at 454.639 kb on - strand, within LRK55_RS02075 at 454.668 kb on + strand, within LRK55_RS02075 at 454.668 kb on + strand, within LRK55_RS02075 at 454.668 kb on + strand, within LRK55_RS02075 at 454.668 kb on + strand, within LRK55_RS02075 at 454.669 kb on - strand, within LRK55_RS02075 at 454.669 kb on - strand, within LRK55_RS02075 at 454.669 kb on - strand, within LRK55_RS02075 at 454.669 kb on - strand, within LRK55_RS02075 at 454.669 kb on - strand, within LRK55_RS02075 at 454.669 kb on - strand, within LRK55_RS02075 at 454.669 kb on - strand, within LRK55_RS02075 at 454.669 kb on - strand, within LRK55_RS02075 at 454.707 kb on + strand, within LRK55_RS02075 at 454.707 kb on + strand, within LRK55_RS02075 at 454.707 kb on + strand, within LRK55_RS02075 at 454.707 kb on + strand, within LRK55_RS02075 at 454.707 kb on + strand, within LRK55_RS02075 at 454.707 kb on + strand, within LRK55_RS02075 at 454.707 kb on + strand, within LRK55_RS02075 at 454.708 kb on - strand, within LRK55_RS02075 at 454.708 kb on - strand, within LRK55_RS02075 at 454.708 kb on - strand, within LRK55_RS02075 at 454.708 kb on - strand, within LRK55_RS02075 at 454.708 kb on - strand, within LRK55_RS02075 at 454.708 kb on - strand, within LRK55_RS02075 at 454.708 kb on - strand, within LRK55_RS02075 at 454.708 kb on - strand, within LRK55_RS02075 at 454.716 kb on + strand, within LRK55_RS02075 at 454.717 kb on - strand, within LRK55_RS02075 at 454.717 kb on - strand, within LRK55_RS02075 at 454.717 kb on - strand, within LRK55_RS02075 at 454.717 kb on - strand, within LRK55_RS02075 at 454.761 kb on + strand, within LRK55_RS02075 at 454.761 kb on + strand, within LRK55_RS02075 at 454.761 kb on + strand, within LRK55_RS02075 at 454.770 kb on + strand, within LRK55_RS02075 at 454.770 kb on + strand, within LRK55_RS02075 at 454.770 kb on + strand, within LRK55_RS02075 at 454.770 kb on + strand, within LRK55_RS02075 at 454.771 kb on - strand, within LRK55_RS02075 at 454.771 kb on - strand, within LRK55_RS02075 at 454.792 kb on - strand, within LRK55_RS02075 at 454.928 kb on + strand at 454.928 kb on + strand at 454.928 kb on + strand at 454.928 kb on + strand at 454.928 kb on + strand at 454.929 kb on - strand at 454.929 kb on - strand at 454.929 kb on - strand at 454.929 kb on - strand at 455.097 kb on + strand at 455.123 kb on + strand at 455.123 kb on + strand at 455.346 kb on + strand, within LRK55_RS02080 at 455.346 kb on + strand, within LRK55_RS02080 at 455.346 kb on + strand, within LRK55_RS02080 at 455.347 kb on - strand, within LRK55_RS02080 at 455.347 kb on - strand, within LRK55_RS02080 at 455.347 kb on - strand, within LRK55_RS02080 at 455.347 kb on - strand, within LRK55_RS02080 at 455.347 kb on - strand, within LRK55_RS02080 at 455.591 kb on + strand, within LRK55_RS02080 at 455.592 kb on - strand, within LRK55_RS02080 at 455.618 kb on + strand, within LRK55_RS02080 at 455.849 kb on + strand at 455.849 kb on + strand at 455.849 kb on + strand at 455.849 kb on + strand at 455.849 kb on + strand at 455.849 kb on + strand at 455.849 kb on + strand at 455.903 kb on + strand at 455.904 kb on - strand at 455.904 kb on - strand at 455.904 kb on - strand at 455.920 kb on + strand at 455.920 kb on + strand at 455.920 kb on + strand at 455.920 kb on + strand at 455.920 kb on + strand at 455.921 kb on - strand at 455.921 kb on - strand at 455.990 kb on + strand at 455.990 kb on + strand at 455.991 kb on - strand at 455.991 kb on - strand at 455.991 kb on - strand at 455.991 kb on - strand at 455.991 kb on - strand at 456.000 kb on + strand at 456.015 kb on - strand at 456.087 kb on + strand at 456.087 kb on + strand at 456.087 kb on + strand at 456.088 kb on - strand at 456.094 kb on + strand, within LRK55_RS02085 at 456.094 kb on + strand, within LRK55_RS02085 at 456.094 kb on + strand, within LRK55_RS02085 at 456.094 kb on + strand, within LRK55_RS02085 at 456.095 kb on - strand, within LRK55_RS02085 at 456.095 kb on - strand, within LRK55_RS02085 at 456.095 kb on - strand, within LRK55_RS02085 at 456.159 kb on + strand, within LRK55_RS02085 at 456.159 kb on + strand, within LRK55_RS02085 at 456.160 kb on - strand, within LRK55_RS02085 at 456.160 kb on - strand, within LRK55_RS02085 at 456.255 kb on + strand, within LRK55_RS02085 at 456.255 kb on + strand, within LRK55_RS02085 at 456.255 kb on + strand, within LRK55_RS02085 at 456.255 kb on + strand, within LRK55_RS02085 at 456.256 kb on - strand, within LRK55_RS02085 at 456.256 kb on - strand, within LRK55_RS02085 at 456.297 kb on + strand, within LRK55_RS02085 at 456.297 kb on + strand, within LRK55_RS02085 at 456.297 kb on + strand, within LRK55_RS02085 at 456.297 kb on + strand, within LRK55_RS02085 at 456.297 kb on + strand, within LRK55_RS02085 at 456.297 kb on + strand, within LRK55_RS02085 at 456.297 kb on + strand, within LRK55_RS02085 at 456.297 kb on + strand, within LRK55_RS02085 at 456.298 kb on - strand, within LRK55_RS02085 at 456.298 kb on - strand, within LRK55_RS02085 at 456.298 kb on - strand, within LRK55_RS02085 at 456.307 kb on - strand, within LRK55_RS02085 at 456.345 kb on + strand, within LRK55_RS02085 at 456.345 kb on + strand, within LRK55_RS02085 at 456.346 kb on - strand, within LRK55_RS02085 at 456.372 kb on + strand, within LRK55_RS02085 at 456.372 kb on + strand, within LRK55_RS02085 at 456.372 kb on + strand, within LRK55_RS02085 at 456.372 kb on + strand, within LRK55_RS02085 at 456.372 kb on + strand, within LRK55_RS02085 at 456.372 kb on + strand, within LRK55_RS02085 at 456.372 kb on + strand, within LRK55_RS02085 at 456.372 kb on + strand, within LRK55_RS02085 at 456.373 kb on - strand, within LRK55_RS02085 at 456.373 kb on - strand, within LRK55_RS02085 at 456.373 kb on - strand, within LRK55_RS02085 at 456.373 kb on - strand, within LRK55_RS02085 at 456.373 kb on - strand, within LRK55_RS02085 at 456.373 kb on - strand, within LRK55_RS02085 at 456.373 kb on - strand, within LRK55_RS02085 at 456.531 kb on + strand, within LRK55_RS02085 at 456.531 kb on + strand, within LRK55_RS02085 at 456.531 kb on + strand, within LRK55_RS02085 at 456.531 kb on + strand, within LRK55_RS02085 at 456.531 kb on + strand, within LRK55_RS02085 at 456.531 kb on + strand, within LRK55_RS02085 at 456.532 kb on - strand, within LRK55_RS02085 at 456.532 kb on - strand, within LRK55_RS02085 at 456.532 kb on - strand, within LRK55_RS02085 at 456.532 kb on - strand, within LRK55_RS02085 at 456.532 kb on - strand, within LRK55_RS02085 at 456.642 kb on + strand at 456.642 kb on + strand at 456.642 kb on + strand at 456.642 kb on + strand at 456.643 kb on - strand at 456.643 kb on - strand at 456.695 kb on + strand at 456.733 kb on + strand at 456.776 kb on - strand at 456.776 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 454,143 + LRK55_RS02070 0.52 -0.4 454,144 - LRK55_RS02070 0.52 -0.0 454,144 - LRK55_RS02070 0.52 +0.9 454,281 + LRK55_RS02070 0.77 -1.0 454,281 + LRK55_RS02070 0.77 -0.3 454,281 + LRK55_RS02070 0.77 -1.3 454,282 - LRK55_RS02070 0.77 -0.3 454,282 - LRK55_RS02070 0.77 +2.8 454,282 - LRK55_RS02070 0.77 -0.2 454,282 - LRK55_RS02070 0.77 +1.6 454,382 + +0.5 454,383 - +1.2 454,488 + +0.2 454,488 + -2.8 454,489 - +0.3 454,489 - +1.2 454,543 - LRK55_RS02075 0.12 -1.9 454,543 - LRK55_RS02075 0.12 +1.2 454,599 + LRK55_RS02075 0.25 +0.1 454,599 + LRK55_RS02075 0.25 +1.0 454,599 + LRK55_RS02075 0.25 +0.7 454,599 + LRK55_RS02075 0.25 +0.5 454,599 + LRK55_RS02075 0.25 +1.7 454,599 + LRK55_RS02075 0.25 -1.0 454,600 - LRK55_RS02075 0.25 -0.2 454,600 - LRK55_RS02075 0.25 -0.5 454,623 + LRK55_RS02075 0.30 +1.0 454,623 + LRK55_RS02075 0.30 +1.9 454,639 - LRK55_RS02075 0.34 +1.8 454,668 + LRK55_RS02075 0.40 +0.4 454,668 + LRK55_RS02075 0.40 +0.5 454,668 + LRK55_RS02075 0.40 -0.5 454,668 + LRK55_RS02075 0.40 -0.3 454,669 - LRK55_RS02075 0.40 +0.5 454,669 - LRK55_RS02075 0.40 +0.0 454,669 - LRK55_RS02075 0.40 +0.9 454,669 - LRK55_RS02075 0.40 -1.1 454,669 - LRK55_RS02075 0.40 +0.1 454,669 - LRK55_RS02075 0.40 -0.0 454,669 - LRK55_RS02075 0.40 +0.6 454,669 - LRK55_RS02075 0.40 +0.7 454,707 + LRK55_RS02075 0.49 -1.0 454,707 + LRK55_RS02075 0.49 -1.9 454,707 + LRK55_RS02075 0.49 -1.9 454,707 + LRK55_RS02075 0.49 -0.9 454,707 + LRK55_RS02075 0.49 +0.2 454,707 + LRK55_RS02075 0.49 -2.0 454,707 + LRK55_RS02075 0.49 +0.2 454,708 - LRK55_RS02075 0.49 +0.7 454,708 - LRK55_RS02075 0.49 +0.4 454,708 - LRK55_RS02075 0.49 -3.0 454,708 - LRK55_RS02075 0.49 +1.1 454,708 - LRK55_RS02075 0.49 +0.1 454,708 - LRK55_RS02075 0.49 -0.5 454,708 - LRK55_RS02075 0.49 +0.8 454,708 - LRK55_RS02075 0.49 -3.2 454,716 + LRK55_RS02075 0.51 -2.8 454,717 - LRK55_RS02075 0.51 -1.8 454,717 - LRK55_RS02075 0.51 +0.5 454,717 - LRK55_RS02075 0.51 +1.2 454,717 - LRK55_RS02075 0.51 -2.1 454,761 + LRK55_RS02075 0.60 -1.7 454,761 + LRK55_RS02075 0.60 -1.7 454,761 + LRK55_RS02075 0.60 +1.7 454,770 + LRK55_RS02075 0.62 +1.9 454,770 + LRK55_RS02075 0.62 -0.1 454,770 + LRK55_RS02075 0.62 +0.4 454,770 + LRK55_RS02075 0.62 +1.2 454,771 - LRK55_RS02075 0.63 +1.8 454,771 - LRK55_RS02075 0.63 +0.3 454,792 - LRK55_RS02075 0.67 +0.4 454,928 + +0.6 454,928 + +1.7 454,928 + +1.8 454,928 + -1.0 454,928 + -0.0 454,929 - +1.1 454,929 - -1.3 454,929 - +0.6 454,929 - -1.2 455,097 + -3.0 455,123 + +0.5 455,123 + +0.9 455,346 + LRK55_RS02080 0.27 -2.4 455,346 + LRK55_RS02080 0.27 -2.1 455,346 + LRK55_RS02080 0.27 -2.0 455,347 - LRK55_RS02080 0.27 +1.0 455,347 - LRK55_RS02080 0.27 +1.0 455,347 - LRK55_RS02080 0.27 +3.2 455,347 - LRK55_RS02080 0.27 +0.8 455,347 - LRK55_RS02080 0.27 +0.3 455,591 + LRK55_RS02080 0.59 -2.2 455,592 - LRK55_RS02080 0.59 +0.2 455,618 + LRK55_RS02080 0.62 +1.5 455,849 + +0.7 455,849 + -1.5 455,849 + -1.7 455,849 + -1.3 455,849 + -0.0 455,849 + -0.3 455,849 + -1.7 455,903 + -0.5 455,904 - -0.7 455,904 - +0.5 455,904 - -3.8 455,920 + +0.0 455,920 + +0.5 455,920 + -2.9 455,920 + -1.4 455,920 + -1.1 455,921 - -2.0 455,921 - +0.0 455,990 + -0.0 455,990 + -2.3 455,991 - +0.1 455,991 - +1.5 455,991 - +0.5 455,991 - +0.4 455,991 - -0.3 456,000 + -1.0 456,015 - -0.8 456,087 + +0.8 456,087 + -0.7 456,087 + -1.3 456,088 - +1.6 456,094 + LRK55_RS02085 0.11 -0.0 456,094 + LRK55_RS02085 0.11 -0.0 456,094 + LRK55_RS02085 0.11 +0.9 456,094 + LRK55_RS02085 0.11 +0.8 456,095 - LRK55_RS02085 0.11 +0.8 456,095 - LRK55_RS02085 0.11 +1.4 456,095 - LRK55_RS02085 0.11 -0.3 456,159 + LRK55_RS02085 0.22 +1.3 456,159 + LRK55_RS02085 0.22 +0.3 456,160 - LRK55_RS02085 0.23 -3.6 456,160 - LRK55_RS02085 0.23 -0.3 456,255 + LRK55_RS02085 0.39 +0.9 456,255 + LRK55_RS02085 0.39 -0.1 456,255 + LRK55_RS02085 0.39 -0.2 456,255 + LRK55_RS02085 0.39 -1.5 456,256 - LRK55_RS02085 0.40 -0.7 456,256 - LRK55_RS02085 0.40 +1.3 456,297 + LRK55_RS02085 0.47 -0.8 456,297 + LRK55_RS02085 0.47 +0.3 456,297 + LRK55_RS02085 0.47 -0.7 456,297 + LRK55_RS02085 0.47 -0.7 456,297 + LRK55_RS02085 0.47 -0.7 456,297 + LRK55_RS02085 0.47 +2.1 456,297 + LRK55_RS02085 0.47 -2.5 456,297 + LRK55_RS02085 0.47 -2.7 456,298 - LRK55_RS02085 0.47 +0.7 456,298 - LRK55_RS02085 0.47 +0.4 456,298 - LRK55_RS02085 0.47 +0.5 456,307 - LRK55_RS02085 0.49 -1.0 456,345 + LRK55_RS02085 0.55 -1.3 456,345 + LRK55_RS02085 0.55 -0.3 456,346 - LRK55_RS02085 0.55 +1.1 456,372 + LRK55_RS02085 0.60 +1.6 456,372 + LRK55_RS02085 0.60 -0.2 456,372 + LRK55_RS02085 0.60 +0.2 456,372 + LRK55_RS02085 0.60 -0.2 456,372 + LRK55_RS02085 0.60 +0.8 456,372 + LRK55_RS02085 0.60 +0.6 456,372 + LRK55_RS02085 0.60 +0.1 456,372 + LRK55_RS02085 0.60 +0.4 456,373 - LRK55_RS02085 0.60 +0.9 456,373 - LRK55_RS02085 0.60 -0.4 456,373 - LRK55_RS02085 0.60 +0.4 456,373 - LRK55_RS02085 0.60 -1.9 456,373 - LRK55_RS02085 0.60 +1.0 456,373 - LRK55_RS02085 0.60 +0.5 456,373 - LRK55_RS02085 0.60 +0.9 456,531 + LRK55_RS02085 0.88 +0.5 456,531 + LRK55_RS02085 0.88 +1.6 456,531 + LRK55_RS02085 0.88 -1.9 456,531 + LRK55_RS02085 0.88 -1.1 456,531 + LRK55_RS02085 0.88 +0.4 456,531 + LRK55_RS02085 0.88 -1.5 456,532 - LRK55_RS02085 0.88 -0.8 456,532 - LRK55_RS02085 0.88 -0.6 456,532 - LRK55_RS02085 0.88 -0.8 456,532 - LRK55_RS02085 0.88 -0.1 456,532 - LRK55_RS02085 0.88 +0.1 456,642 + +0.6 456,642 + +0.9 456,642 + +1.6 456,642 + +0.7 456,643 - +2.0 456,643 - -2.2 456,695 + -3.1 456,733 + -3.9 456,776 - -1.3 456,776 - +0.4
Or see this region's nucleotide sequence