Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt LRK55_RS02050 and LRK55_RS02055 overlap by 4 nucleotides LRK55_RS02055 and LRK55_RS02060 are separated by 56 nucleotides LRK55_RS02060 and LRK55_RS02065 are separated by 9 nucleotides LRK55_RS02065 and LRK55_RS02070 are separated by 10 nucleotides
LRK55_RS02050: LRK55_RS02050 - NUDIX domain-containing protein, at 451,573 to 452,049
_RS02050
LRK55_RS02055: LRK55_RS02055 - glutathione S-transferase family protein, at 452,046 to 452,681
_RS02055
LRK55_RS02060: LRK55_RS02060 - GNAT family N-acetyltransferase, at 452,738 to 453,226
_RS02060
LRK55_RS02065: LRK55_RS02065 - YdeI/OmpD-associated family protein, at 453,236 to 453,838
_RS02065
LRK55_RS02070: LRK55_RS02070 - GNAT family N-acetyltransferase, at 453,849 to 454,412
_RS02070
Position (kb) 452
453
454 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 451.799 kb on + strand, within LRK55_RS02050 at 451.799 kb on + strand, within LRK55_RS02050 at 451.799 kb on + strand, within LRK55_RS02050 at 451.799 kb on + strand, within LRK55_RS02050 at 451.799 kb on + strand, within LRK55_RS02050 at 451.800 kb on - strand, within LRK55_RS02050 at 451.800 kb on - strand, within LRK55_RS02050 at 451.800 kb on - strand, within LRK55_RS02050 at 451.919 kb on + strand, within LRK55_RS02050 at 451.919 kb on + strand, within LRK55_RS02050 at 451.940 kb on + strand, within LRK55_RS02050 at 452.179 kb on + strand, within LRK55_RS02055 at 452.179 kb on + strand, within LRK55_RS02055 at 452.179 kb on + strand, within LRK55_RS02055 at 452.179 kb on + strand, within LRK55_RS02055 at 452.180 kb on - strand, within LRK55_RS02055 at 452.180 kb on - strand, within LRK55_RS02055 at 452.180 kb on - strand, within LRK55_RS02055 at 452.180 kb on - strand, within LRK55_RS02055 at 452.180 kb on - strand, within LRK55_RS02055 at 452.344 kb on + strand, within LRK55_RS02055 at 452.671 kb on + strand at 452.703 kb on - strand at 452.703 kb on - strand at 452.703 kb on - strand at 452.712 kb on + strand at 452.712 kb on + strand at 452.712 kb on + strand at 452.712 kb on + strand at 452.712 kb on + strand at 452.712 kb on + strand at 452.712 kb on + strand at 452.712 kb on + strand at 452.712 kb on + strand at 452.712 kb on + strand at 452.712 kb on + strand at 452.712 kb on + strand at 452.713 kb on - strand at 452.713 kb on - strand at 452.713 kb on - strand at 452.713 kb on - strand at 452.713 kb on - strand at 452.713 kb on - strand at 452.713 kb on - strand at 452.713 kb on - strand at 452.713 kb on - strand at 452.713 kb on - strand at 452.750 kb on + strand at 452.750 kb on + strand at 452.750 kb on + strand at 452.750 kb on + strand at 452.750 kb on + strand at 452.751 kb on - strand at 452.885 kb on + strand, within LRK55_RS02060 at 452.906 kb on + strand, within LRK55_RS02060 at 452.906 kb on + strand, within LRK55_RS02060 at 452.907 kb on - strand, within LRK55_RS02060 at 452.907 kb on - strand, within LRK55_RS02060 at 452.907 kb on - strand, within LRK55_RS02060 at 452.907 kb on - strand, within LRK55_RS02060 at 452.907 kb on - strand, within LRK55_RS02060 at 453.002 kb on + strand, within LRK55_RS02060 at 453.002 kb on + strand, within LRK55_RS02060 at 453.002 kb on + strand, within LRK55_RS02060 at 453.002 kb on + strand, within LRK55_RS02060 at 453.002 kb on + strand, within LRK55_RS02060 at 453.002 kb on + strand, within LRK55_RS02060 at 453.002 kb on + strand, within LRK55_RS02060 at 453.002 kb on + strand, within LRK55_RS02060 at 453.002 kb on + strand, within LRK55_RS02060 at 453.002 kb on + strand, within LRK55_RS02060 at 453.002 kb on + strand, within LRK55_RS02060 at 453.002 kb on + strand, within LRK55_RS02060 at 453.002 kb on + strand, within LRK55_RS02060 at 453.002 kb on + strand, within LRK55_RS02060 at 453.002 kb on + strand, within LRK55_RS02060 at 453.002 kb on + strand, within LRK55_RS02060 at 453.002 kb on + strand, within LRK55_RS02060 at 453.003 kb on - strand, within LRK55_RS02060 at 453.003 kb on - strand, within LRK55_RS02060 at 453.003 kb on - strand, within LRK55_RS02060 at 453.003 kb on - strand, within LRK55_RS02060 at 453.003 kb on - strand, within LRK55_RS02060 at 453.003 kb on - strand, within LRK55_RS02060 at 453.003 kb on - strand, within LRK55_RS02060 at 453.003 kb on - strand, within LRK55_RS02060 at 453.003 kb on - strand, within LRK55_RS02060 at 453.003 kb on - strand, within LRK55_RS02060 at 453.095 kb on + strand, within LRK55_RS02060 at 453.096 kb on - strand, within LRK55_RS02060 at 453.096 kb on - strand, within LRK55_RS02060 at 453.096 kb on - strand, within LRK55_RS02060 at 453.096 kb on - strand, within LRK55_RS02060 at 453.096 kb on - strand, within LRK55_RS02060 at 453.096 kb on - strand, within LRK55_RS02060 at 453.137 kb on + strand, within LRK55_RS02060 at 453.137 kb on + strand, within LRK55_RS02060 at 453.138 kb on - strand, within LRK55_RS02060 at 453.138 kb on - strand, within LRK55_RS02060 at 453.138 kb on - strand, within LRK55_RS02060 at 453.206 kb on + strand at 453.207 kb on - strand at 453.207 kb on - strand at 453.266 kb on + strand at 453.266 kb on + strand at 453.266 kb on + strand at 453.266 kb on + strand at 453.266 kb on + strand at 453.266 kb on + strand at 453.266 kb on + strand at 453.266 kb on + strand at 453.266 kb on + strand at 453.266 kb on + strand at 453.266 kb on + strand at 453.267 kb on - strand at 453.267 kb on - strand at 453.267 kb on - strand at 453.267 kb on - strand at 453.267 kb on - strand at 453.267 kb on - strand at 453.267 kb on - strand at 453.267 kb on - strand at 453.268 kb on + strand at 453.383 kb on + strand, within LRK55_RS02065 at 453.383 kb on + strand, within LRK55_RS02065 at 453.383 kb on + strand, within LRK55_RS02065 at 453.383 kb on + strand, within LRK55_RS02065 at 453.383 kb on + strand, within LRK55_RS02065 at 453.383 kb on + strand, within LRK55_RS02065 at 453.384 kb on - strand, within LRK55_RS02065 at 453.384 kb on - strand, within LRK55_RS02065 at 453.384 kb on - strand, within LRK55_RS02065 at 453.722 kb on + strand, within LRK55_RS02065 at 453.723 kb on - strand, within LRK55_RS02065 at 453.723 kb on - strand, within LRK55_RS02065 at 453.723 kb on - strand, within LRK55_RS02065 at 453.824 kb on + strand at 453.825 kb on - strand at 453.825 kb on - strand at 453.825 kb on - strand at 453.897 kb on + strand at 453.897 kb on + strand at 453.897 kb on + strand at 453.897 kb on + strand at 453.897 kb on + strand at 453.897 kb on + strand at 453.897 kb on + strand at 453.897 kb on + strand at 453.897 kb on + strand at 453.898 kb on - strand at 453.898 kb on - strand at 453.898 kb on - strand at 453.898 kb on - strand at 453.898 kb on - strand at 453.898 kb on - strand at 453.898 kb on - strand at 453.898 kb on - strand at 453.898 kb on - strand at 453.993 kb on + strand, within LRK55_RS02070 at 453.993 kb on + strand, within LRK55_RS02070 at 453.994 kb on - strand, within LRK55_RS02070 at 454.035 kb on + strand, within LRK55_RS02070 at 454.035 kb on + strand, within LRK55_RS02070 at 454.035 kb on + strand, within LRK55_RS02070 at 454.036 kb on - strand, within LRK55_RS02070 at 454.036 kb on - strand, within LRK55_RS02070 at 454.041 kb on + strand, within LRK55_RS02070 at 454.041 kb on + strand, within LRK55_RS02070 at 454.041 kb on + strand, within LRK55_RS02070 at 454.041 kb on + strand, within LRK55_RS02070 at 454.041 kb on + strand, within LRK55_RS02070 at 454.042 kb on - strand, within LRK55_RS02070 at 454.042 kb on - strand, within LRK55_RS02070 at 454.042 kb on - strand, within LRK55_RS02070 at 454.042 kb on - strand, within LRK55_RS02070 at 454.042 kb on - strand, within LRK55_RS02070 at 454.042 kb on - strand, within LRK55_RS02070 at 454.071 kb on + strand, within LRK55_RS02070 at 454.098 kb on + strand, within LRK55_RS02070 at 454.098 kb on + strand, within LRK55_RS02070 at 454.098 kb on + strand, within LRK55_RS02070 at 454.098 kb on + strand, within LRK55_RS02070 at 454.098 kb on + strand, within LRK55_RS02070 at 454.098 kb on + strand, within LRK55_RS02070 at 454.099 kb on - strand, within LRK55_RS02070 at 454.099 kb on - strand, within LRK55_RS02070 at 454.099 kb on - strand, within LRK55_RS02070 at 454.099 kb on - strand, within LRK55_RS02070 at 454.099 kb on - strand, within LRK55_RS02070 at 454.099 kb on - strand, within LRK55_RS02070 at 454.143 kb on + strand, within LRK55_RS02070 at 454.144 kb on - strand, within LRK55_RS02070 at 454.144 kb on - strand, within LRK55_RS02070
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 451,799 + LRK55_RS02050 0.47 +0.5 451,799 + LRK55_RS02050 0.47 +0.8 451,799 + LRK55_RS02050 0.47 +0.5 451,799 + LRK55_RS02050 0.47 -2.3 451,799 + LRK55_RS02050 0.47 -1.0 451,800 - LRK55_RS02050 0.48 +0.2 451,800 - LRK55_RS02050 0.48 -0.9 451,800 - LRK55_RS02050 0.48 +1.3 451,919 + LRK55_RS02050 0.73 -3.2 451,919 + LRK55_RS02050 0.73 +0.3 451,940 + LRK55_RS02050 0.77 +0.9 452,179 + LRK55_RS02055 0.21 +0.5 452,179 + LRK55_RS02055 0.21 +0.4 452,179 + LRK55_RS02055 0.21 +2.6 452,179 + LRK55_RS02055 0.21 +0.2 452,180 - LRK55_RS02055 0.21 +1.2 452,180 - LRK55_RS02055 0.21 -0.4 452,180 - LRK55_RS02055 0.21 -0.5 452,180 - LRK55_RS02055 0.21 -0.5 452,180 - LRK55_RS02055 0.21 -1.1 452,344 + LRK55_RS02055 0.47 -0.5 452,671 + -0.3 452,703 - +1.0 452,703 - -0.7 452,703 - -1.7 452,712 + -0.5 452,712 + +0.2 452,712 + +1.0 452,712 + -1.5 452,712 + -1.5 452,712 + -0.8 452,712 + +0.7 452,712 + -0.2 452,712 + +1.8 452,712 + +0.2 452,712 + +0.5 452,712 + +1.0 452,713 - +0.2 452,713 - -0.0 452,713 - -0.8 452,713 - -0.1 452,713 - +1.8 452,713 - -1.0 452,713 - -3.2 452,713 - -0.3 452,713 - +1.1 452,713 - +1.0 452,750 + -0.2 452,750 + -0.4 452,750 + -0.2 452,750 + -1.4 452,750 + +0.3 452,751 - +0.1 452,885 + LRK55_RS02060 0.30 -0.3 452,906 + LRK55_RS02060 0.34 -1.3 452,906 + LRK55_RS02060 0.34 -0.8 452,907 - LRK55_RS02060 0.35 +0.2 452,907 - LRK55_RS02060 0.35 -3.3 452,907 - LRK55_RS02060 0.35 -1.6 452,907 - LRK55_RS02060 0.35 -1.9 452,907 - LRK55_RS02060 0.35 -2.0 453,002 + LRK55_RS02060 0.54 +0.6 453,002 + LRK55_RS02060 0.54 +1.8 453,002 + LRK55_RS02060 0.54 -0.5 453,002 + LRK55_RS02060 0.54 +0.9 453,002 + LRK55_RS02060 0.54 +0.5 453,002 + LRK55_RS02060 0.54 +3.4 453,002 + LRK55_RS02060 0.54 -2.7 453,002 + LRK55_RS02060 0.54 -1.3 453,002 + LRK55_RS02060 0.54 -1.3 453,002 + LRK55_RS02060 0.54 +2.0 453,002 + LRK55_RS02060 0.54 -0.7 453,002 + LRK55_RS02060 0.54 +0.5 453,002 + LRK55_RS02060 0.54 -1.2 453,002 + LRK55_RS02060 0.54 +0.7 453,002 + LRK55_RS02060 0.54 +0.1 453,002 + LRK55_RS02060 0.54 -0.5 453,002 + LRK55_RS02060 0.54 -1.0 453,003 - LRK55_RS02060 0.54 -2.0 453,003 - LRK55_RS02060 0.54 -0.8 453,003 - LRK55_RS02060 0.54 -0.8 453,003 - LRK55_RS02060 0.54 -0.8 453,003 - LRK55_RS02060 0.54 +1.4 453,003 - LRK55_RS02060 0.54 +0.6 453,003 - LRK55_RS02060 0.54 +0.3 453,003 - LRK55_RS02060 0.54 +1.2 453,003 - LRK55_RS02060 0.54 -0.1 453,003 - LRK55_RS02060 0.54 +1.1 453,095 + LRK55_RS02060 0.73 +1.1 453,096 - LRK55_RS02060 0.73 -0.9 453,096 - LRK55_RS02060 0.73 -0.7 453,096 - LRK55_RS02060 0.73 -0.9 453,096 - LRK55_RS02060 0.73 -0.3 453,096 - LRK55_RS02060 0.73 -0.9 453,096 - LRK55_RS02060 0.73 +1.3 453,137 + LRK55_RS02060 0.82 +1.8 453,137 + LRK55_RS02060 0.82 +0.1 453,138 - LRK55_RS02060 0.82 -2.1 453,138 - LRK55_RS02060 0.82 +0.7 453,138 - LRK55_RS02060 0.82 +0.5 453,206 + -0.7 453,207 - +0.9 453,207 - +0.4 453,266 + -0.1 453,266 + +1.5 453,266 + +1.9 453,266 + +2.2 453,266 + +0.1 453,266 + -1.7 453,266 + +0.5 453,266 + +0.5 453,266 + -2.0 453,266 + +0.4 453,266 + +1.0 453,267 - +1.5 453,267 - -0.7 453,267 - +0.9 453,267 - -0.4 453,267 - -1.7 453,267 - +0.3 453,267 - -0.6 453,267 - -1.3 453,268 + +2.0 453,383 + LRK55_RS02065 0.24 -1.5 453,383 + LRK55_RS02065 0.24 +0.7 453,383 + LRK55_RS02065 0.24 -0.1 453,383 + LRK55_RS02065 0.24 -0.0 453,383 + LRK55_RS02065 0.24 +0.5 453,383 + LRK55_RS02065 0.24 +1.8 453,384 - LRK55_RS02065 0.25 -1.9 453,384 - LRK55_RS02065 0.25 +0.3 453,384 - LRK55_RS02065 0.25 +2.4 453,722 + LRK55_RS02065 0.81 +1.9 453,723 - LRK55_RS02065 0.81 +1.3 453,723 - LRK55_RS02065 0.81 -1.2 453,723 - LRK55_RS02065 0.81 +0.8 453,824 + +0.8 453,825 - +0.2 453,825 - -0.1 453,825 - -0.7 453,897 + -0.0 453,897 + +0.1 453,897 + -0.7 453,897 + -1.2 453,897 + -1.3 453,897 + +0.6 453,897 + +1.0 453,897 + -0.6 453,897 + -1.3 453,898 - +0.7 453,898 - +1.3 453,898 - -1.0 453,898 - +1.0 453,898 - -3.1 453,898 - -0.5 453,898 - -1.0 453,898 - +0.7 453,898 - +0.9 453,993 + LRK55_RS02070 0.26 +0.5 453,993 + LRK55_RS02070 0.26 -0.1 453,994 - LRK55_RS02070 0.26 +0.6 454,035 + LRK55_RS02070 0.33 +0.5 454,035 + LRK55_RS02070 0.33 -0.3 454,035 + LRK55_RS02070 0.33 +0.4 454,036 - LRK55_RS02070 0.33 +0.0 454,036 - LRK55_RS02070 0.33 +1.1 454,041 + LRK55_RS02070 0.34 +2.7 454,041 + LRK55_RS02070 0.34 +0.6 454,041 + LRK55_RS02070 0.34 -0.3 454,041 + LRK55_RS02070 0.34 +0.7 454,041 + LRK55_RS02070 0.34 +1.0 454,042 - LRK55_RS02070 0.34 -0.5 454,042 - LRK55_RS02070 0.34 -0.1 454,042 - LRK55_RS02070 0.34 +2.3 454,042 - LRK55_RS02070 0.34 +1.5 454,042 - LRK55_RS02070 0.34 +0.6 454,042 - LRK55_RS02070 0.34 +0.9 454,071 + LRK55_RS02070 0.39 +2.0 454,098 + LRK55_RS02070 0.44 -2.6 454,098 + LRK55_RS02070 0.44 +2.9 454,098 + LRK55_RS02070 0.44 +0.5 454,098 + LRK55_RS02070 0.44 -2.4 454,098 + LRK55_RS02070 0.44 +0.4 454,098 + LRK55_RS02070 0.44 +0.4 454,099 - LRK55_RS02070 0.44 -2.9 454,099 - LRK55_RS02070 0.44 -1.3 454,099 - LRK55_RS02070 0.44 -0.9 454,099 - LRK55_RS02070 0.44 -1.6 454,099 - LRK55_RS02070 0.44 -0.7 454,099 - LRK55_RS02070 0.44 +0.6 454,143 + LRK55_RS02070 0.52 -0.4 454,144 - LRK55_RS02070 0.52 -0.0 454,144 - LRK55_RS02070 0.52 +0.9
Or see this region's nucleotide sequence