Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt LRK55_RS01690 and LRK55_RS01695 are separated by 33 nucleotides LRK55_RS01695 and LRK55_RS01700 are separated by 61 nucleotides LRK55_RS01700 and LRK55_RS01705 are separated by 44 nucleotides
LRK55_RS01690: LRK55_RS01690 - DMT family transporter, at 356,737 to 357,666
_RS01690
LRK55_RS01695: LRK55_RS01695 - class I SAM-dependent methyltransferase, at 357,700 to 358,344
_RS01695
LRK55_RS01700: LRK55_RS01700 - chromate efflux transporter, at 358,406 to 359,818
_RS01700
LRK55_RS01705: LRK55_RS01705 - LppY/LpqO family protein, at 359,863 to 360,777
_RS01705
Position (kb) 358
359
360 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 357.783 kb on + strand, within LRK55_RS01695 at 357.784 kb on - strand, within LRK55_RS01695 at 358.021 kb on + strand, within LRK55_RS01695 at 358.085 kb on - strand, within LRK55_RS01695 at 358.190 kb on - strand, within LRK55_RS01695 at 358.398 kb on + strand at 358.398 kb on + strand at 358.399 kb on - strand at 358.551 kb on - strand, within LRK55_RS01700 at 358.710 kb on + strand, within LRK55_RS01700 at 358.710 kb on + strand, within LRK55_RS01700 at 358.710 kb on + strand, within LRK55_RS01700 at 358.711 kb on - strand, within LRK55_RS01700 at 358.711 kb on - strand, within LRK55_RS01700 at 358.729 kb on + strand, within LRK55_RS01700 at 358.729 kb on + strand, within LRK55_RS01700 at 358.729 kb on + strand, within LRK55_RS01700 at 358.730 kb on - strand, within LRK55_RS01700 at 358.730 kb on - strand, within LRK55_RS01700 at 358.953 kb on + strand, within LRK55_RS01700 at 358.968 kb on + strand, within LRK55_RS01700 at 358.968 kb on + strand, within LRK55_RS01700 at 358.969 kb on - strand, within LRK55_RS01700 at 358.969 kb on - strand, within LRK55_RS01700 at 359.105 kb on + strand, within LRK55_RS01700 at 359.105 kb on + strand, within LRK55_RS01700 at 359.105 kb on + strand, within LRK55_RS01700 at 359.105 kb on + strand, within LRK55_RS01700 at 359.105 kb on + strand, within LRK55_RS01700 at 359.106 kb on - strand, within LRK55_RS01700 at 359.106 kb on - strand, within LRK55_RS01700 at 359.106 kb on - strand, within LRK55_RS01700 at 359.106 kb on - strand, within LRK55_RS01700 at 359.106 kb on - strand, within LRK55_RS01700 at 359.173 kb on - strand, within LRK55_RS01700 at 359.173 kb on - strand, within LRK55_RS01700 at 359.325 kb on - strand, within LRK55_RS01700 at 359.388 kb on - strand, within LRK55_RS01700 at 359.447 kb on + strand, within LRK55_RS01700 at 359.448 kb on - strand, within LRK55_RS01700 at 359.448 kb on - strand, within LRK55_RS01700 at 359.448 kb on - strand, within LRK55_RS01700 at 359.457 kb on + strand, within LRK55_RS01700 at 359.457 kb on + strand, within LRK55_RS01700 at 359.457 kb on + strand, within LRK55_RS01700 at 359.457 kb on + strand, within LRK55_RS01700 at 359.458 kb on - strand, within LRK55_RS01700 at 359.458 kb on - strand, within LRK55_RS01700 at 359.458 kb on - strand, within LRK55_RS01700 at 359.458 kb on - strand, within LRK55_RS01700 at 359.458 kb on - strand, within LRK55_RS01700 at 359.458 kb on - strand, within LRK55_RS01700 at 359.544 kb on - strand, within LRK55_RS01700 at 359.556 kb on + strand, within LRK55_RS01700 at 359.556 kb on + strand, within LRK55_RS01700 at 359.556 kb on + strand, within LRK55_RS01700 at 359.556 kb on + strand, within LRK55_RS01700 at 359.556 kb on + strand, within LRK55_RS01700 at 359.556 kb on + strand, within LRK55_RS01700 at 359.556 kb on + strand, within LRK55_RS01700 at 359.556 kb on + strand, within LRK55_RS01700 at 359.556 kb on + strand, within LRK55_RS01700 at 359.556 kb on + strand, within LRK55_RS01700 at 359.556 kb on + strand, within LRK55_RS01700 at 359.556 kb on + strand, within LRK55_RS01700 at 359.556 kb on + strand, within LRK55_RS01700 at 359.556 kb on + strand, within LRK55_RS01700 at 359.556 kb on + strand, within LRK55_RS01700 at 359.556 kb on + strand, within LRK55_RS01700 at 359.556 kb on + strand, within LRK55_RS01700 at 359.556 kb on + strand, within LRK55_RS01700 at 359.557 kb on - strand, within LRK55_RS01700 at 359.557 kb on - strand, within LRK55_RS01700 at 359.557 kb on - strand, within LRK55_RS01700 at 359.557 kb on - strand, within LRK55_RS01700 at 359.557 kb on - strand, within LRK55_RS01700 at 359.557 kb on - strand, within LRK55_RS01700 at 359.557 kb on - strand, within LRK55_RS01700 at 359.601 kb on + strand, within LRK55_RS01700 at 359.601 kb on + strand, within LRK55_RS01700 at 359.601 kb on + strand, within LRK55_RS01700 at 359.601 kb on + strand, within LRK55_RS01700 at 359.602 kb on - strand, within LRK55_RS01700 at 359.602 kb on - strand, within LRK55_RS01700 at 359.602 kb on - strand, within LRK55_RS01700 at 359.602 kb on - strand, within LRK55_RS01700 at 359.836 kb on + strand at 359.836 kb on + strand at 359.966 kb on + strand, within LRK55_RS01705 at 359.969 kb on + strand, within LRK55_RS01705 at 359.970 kb on - strand, within LRK55_RS01705 at 360.258 kb on + strand, within LRK55_RS01705 at 360.259 kb on - strand, within LRK55_RS01705 at 360.398 kb on + strand, within LRK55_RS01705 at 360.398 kb on + strand, within LRK55_RS01705 at 360.398 kb on + strand, within LRK55_RS01705 at 360.398 kb on + strand, within LRK55_RS01705 at 360.399 kb on - strand, within LRK55_RS01705 at 360.399 kb on - strand, within LRK55_RS01705 at 360.417 kb on - strand, within LRK55_RS01705 at 360.417 kb on - strand, within LRK55_RS01705 at 360.478 kb on + strand, within LRK55_RS01705 at 360.478 kb on + strand, within LRK55_RS01705 at 360.479 kb on - strand, within LRK55_RS01705 at 360.479 kb on - strand, within LRK55_RS01705 at 360.793 kb on + strand at 360.793 kb on + strand at 360.794 kb on - strand at 360.794 kb on - strand at 360.794 kb on - strand at 360.794 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 357,783 + LRK55_RS01695 0.13 +1.0 357,784 - LRK55_RS01695 0.13 +1.3 358,021 + LRK55_RS01695 0.50 -1.6 358,085 - LRK55_RS01695 0.60 -0.7 358,190 - LRK55_RS01695 0.76 -0.1 358,398 + +0.7 358,398 + +0.7 358,399 - +1.7 358,551 - LRK55_RS01700 0.10 -0.5 358,710 + LRK55_RS01700 0.22 +0.0 358,710 + LRK55_RS01700 0.22 +1.0 358,710 + LRK55_RS01700 0.22 -1.3 358,711 - LRK55_RS01700 0.22 -0.4 358,711 - LRK55_RS01700 0.22 -0.1 358,729 + LRK55_RS01700 0.23 -0.2 358,729 + LRK55_RS01700 0.23 -0.6 358,729 + LRK55_RS01700 0.23 +0.3 358,730 - LRK55_RS01700 0.23 +1.7 358,730 - LRK55_RS01700 0.23 -0.3 358,953 + LRK55_RS01700 0.39 -0.8 358,968 + LRK55_RS01700 0.40 +0.6 358,968 + LRK55_RS01700 0.40 +1.8 358,969 - LRK55_RS01700 0.40 -3.0 358,969 - LRK55_RS01700 0.40 +0.4 359,105 + LRK55_RS01700 0.49 -2.4 359,105 + LRK55_RS01700 0.49 -0.7 359,105 + LRK55_RS01700 0.49 -1.0 359,105 + LRK55_RS01700 0.49 -0.2 359,105 + LRK55_RS01700 0.49 +1.5 359,106 - LRK55_RS01700 0.50 -0.1 359,106 - LRK55_RS01700 0.50 -0.1 359,106 - LRK55_RS01700 0.50 -0.4 359,106 - LRK55_RS01700 0.50 +0.6 359,106 - LRK55_RS01700 0.50 +0.3 359,173 - LRK55_RS01700 0.54 -1.8 359,173 - LRK55_RS01700 0.54 +0.1 359,325 - LRK55_RS01700 0.65 +0.4 359,388 - LRK55_RS01700 0.69 +1.1 359,447 + LRK55_RS01700 0.74 -0.7 359,448 - LRK55_RS01700 0.74 -1.2 359,448 - LRK55_RS01700 0.74 +0.3 359,448 - LRK55_RS01700 0.74 -2.2 359,457 + LRK55_RS01700 0.74 -0.5 359,457 + LRK55_RS01700 0.74 +1.3 359,457 + LRK55_RS01700 0.74 +3.3 359,457 + LRK55_RS01700 0.74 -1.1 359,458 - LRK55_RS01700 0.74 -4.2 359,458 - LRK55_RS01700 0.74 -0.0 359,458 - LRK55_RS01700 0.74 -0.6 359,458 - LRK55_RS01700 0.74 -0.6 359,458 - LRK55_RS01700 0.74 +0.3 359,458 - LRK55_RS01700 0.74 +0.7 359,544 - LRK55_RS01700 0.81 +1.1 359,556 + LRK55_RS01700 0.81 +2.9 359,556 + LRK55_RS01700 0.81 -2.0 359,556 + LRK55_RS01700 0.81 -1.1 359,556 + LRK55_RS01700 0.81 +0.4 359,556 + LRK55_RS01700 0.81 -2.2 359,556 + LRK55_RS01700 0.81 +0.3 359,556 + LRK55_RS01700 0.81 -1.5 359,556 + LRK55_RS01700 0.81 +1.9 359,556 + LRK55_RS01700 0.81 +0.4 359,556 + LRK55_RS01700 0.81 +1.3 359,556 + LRK55_RS01700 0.81 -0.8 359,556 + LRK55_RS01700 0.81 +1.0 359,556 + LRK55_RS01700 0.81 +0.8 359,556 + LRK55_RS01700 0.81 -1.3 359,556 + LRK55_RS01700 0.81 -1.5 359,556 + LRK55_RS01700 0.81 +0.3 359,556 + LRK55_RS01700 0.81 -0.0 359,556 + LRK55_RS01700 0.81 -1.7 359,557 - LRK55_RS01700 0.81 +0.5 359,557 - LRK55_RS01700 0.81 +0.6 359,557 - LRK55_RS01700 0.81 +0.7 359,557 - LRK55_RS01700 0.81 -1.3 359,557 - LRK55_RS01700 0.81 +1.1 359,557 - LRK55_RS01700 0.81 +1.0 359,557 - LRK55_RS01700 0.81 +0.5 359,601 + LRK55_RS01700 0.85 +1.2 359,601 + LRK55_RS01700 0.85 +0.8 359,601 + LRK55_RS01700 0.85 +0.1 359,601 + LRK55_RS01700 0.85 +1.1 359,602 - LRK55_RS01700 0.85 -0.9 359,602 - LRK55_RS01700 0.85 +0.2 359,602 - LRK55_RS01700 0.85 -0.1 359,602 - LRK55_RS01700 0.85 -0.2 359,836 + +0.8 359,836 + -1.7 359,966 + LRK55_RS01705 0.11 -0.4 359,969 + LRK55_RS01705 0.12 +1.6 359,970 - LRK55_RS01705 0.12 -2.9 360,258 + LRK55_RS01705 0.43 -0.6 360,259 - LRK55_RS01705 0.43 -1.0 360,398 + LRK55_RS01705 0.58 -0.1 360,398 + LRK55_RS01705 0.58 -1.3 360,398 + LRK55_RS01705 0.58 +0.9 360,398 + LRK55_RS01705 0.58 +0.6 360,399 - LRK55_RS01705 0.59 +0.5 360,399 - LRK55_RS01705 0.59 +1.5 360,417 - LRK55_RS01705 0.61 +0.1 360,417 - LRK55_RS01705 0.61 +1.0 360,478 + LRK55_RS01705 0.67 -0.2 360,478 + LRK55_RS01705 0.67 -0.6 360,479 - LRK55_RS01705 0.67 -1.9 360,479 - LRK55_RS01705 0.67 +0.5 360,793 + +0.5 360,793 + +1.3 360,794 - -0.3 360,794 - -1.9 360,794 - +0.3 360,794 - -0.8
Or see this region's nucleotide sequence