Experiment: L-Valine 10 mM (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv1524 and Rv1525 are separated by 46 nucleotides Rv1525 and Rv1526c overlap by 23 nucleotides Rv1526c and Rv1527c are separated by 22 nucleotides
Rv1524: Rv1524 - Probable glycosyltransferase, at 1,718,726 to 1,719,970
Rv1524
Rv1525: Rv1525 - Possible rhamnosyl transferase WbbL2, at 1,720,017 to 1,720,802
Rv1525
Rv1526c: Rv1526c - Probable glycosyltransferase, at 1,720,780 to 1,722,060
Rv1526c
Rv1527c: Rv1527c - Probable polyketide synthase Pks5, at 1,722,083 to 1,728,409
Rv1527c
Position (kb)
1720
1721
1722
1723 Strain fitness (log2 ratio)
-1
0
1 at 1721.142 kb on - strand, within Rv1526c at 1721.306 kb on + strand, within Rv1526c at 1721.307 kb on - strand, within Rv1526c at 1721.365 kb on + strand, within Rv1526c at 1721.445 kb on - strand, within Rv1526c at 1721.562 kb on - strand, within Rv1526c at 1721.685 kb on - strand, within Rv1526c at 1721.687 kb on + strand, within Rv1526c at 1721.717 kb on + strand, within Rv1526c at 1721.717 kb on + strand, within Rv1526c at 1721.800 kb on + strand, within Rv1526c at 1721.800 kb on + strand, within Rv1526c at 1722.617 kb on + strand at 1722.781 kb on - strand, within Rv1527c at 1722.781 kb on - strand, within Rv1527c
Per-strain Table
Position Strand Gene LocusTag Fraction L-Valine 10 mM (N) remove 1,721,142 - Rv1526c 0.28 -0.1 1,721,306 + Rv1526c 0.41 -1.1 1,721,307 - Rv1526c 0.41 -0.2 1,721,365 + Rv1526c 0.46 -0.4 1,721,445 - Rv1526c 0.52 -0.9 1,721,562 - Rv1526c 0.61 +0.3 1,721,685 - Rv1526c 0.71 -0.4 1,721,687 + Rv1526c 0.71 -0.1 1,721,717 + Rv1526c 0.73 +0.7 1,721,717 + Rv1526c 0.73 +0.1 1,721,800 + Rv1526c 0.80 -0.3 1,721,800 + Rv1526c 0.80 +0.1 1,722,617 + -0.6 1,722,781 - Rv1527c 0.11 -0.1 1,722,781 - Rv1527c 0.11 +0.3
Or see this region's nucleotide sequence