Experiment: L-Valine 10 mM (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv3361c and Rv3362c are separated by 6 nucleotides Rv3362c and Rv3363c overlap by 20 nucleotides Rv3363c and Rv3364c overlap by 23 nucleotides Rv3364c and Rv3365c overlap by 4 nucleotides
Rv3361c: Rv3361c - Conserved protein, at 3,773,016 to 3,773,567
Rv3361c
Rv3362c: Rv3362c - Probable ATP/GTP-binding protein, at 3,773,574 to 3,774,155
Rv3362c
Rv3363c: Rv3363c - Conserved hypothetical protein, at 3,774,136 to 3,774,504
Rv3363c
Rv3364c: Rv3364c - Conserved protein, at 3,774,482 to 3,774,874
Rv3364c
Rv3365c: Rv3365c - Conserved protein, at 3,774,871 to 3,777,501
Rv3365c
Position (kb)
3774
3775 Strain fitness (log2 ratio)
-2
-1
0
1 at 3774.436 kb on - strand, within Rv3363c at 3774.436 kb on - strand, within Rv3363c at 3774.455 kb on + strand, within Rv3363c at 3774.456 kb on - strand, within Rv3363c at 3774.484 kb on - strand at 3774.746 kb on + strand, within Rv3364c at 3774.746 kb on + strand, within Rv3364c at 3775.088 kb on - strand at 3775.122 kb on - strand at 3775.368 kb on + strand, within Rv3365c at 3775.368 kb on + strand, within Rv3365c at 3775.368 kb on + strand, within Rv3365c at 3775.369 kb on - strand, within Rv3365c
Per-strain Table
Position Strand Gene LocusTag Fraction L-Valine 10 mM (N) remove 3,774,436 - Rv3363c 0.81 -0.5 3,774,436 - Rv3363c 0.81 -0.5 3,774,455 + Rv3363c 0.86 -2.4 3,774,456 - Rv3363c 0.87 -0.7 3,774,484 - -0.9 3,774,746 + Rv3364c 0.67 -0.4 3,774,746 + Rv3364c 0.67 +0.1 3,775,088 - +0.2 3,775,122 - -1.4 3,775,368 + Rv3365c 0.19 -0.7 3,775,368 + Rv3365c 0.19 -0.1 3,775,368 + Rv3365c 0.19 +0.0 3,775,369 - Rv3365c 0.19 -1.4
Or see this region's nucleotide sequence