Experiment: L-Glutamic 10 mM (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv0293c and Rv0294 are separated by 106 nucleotides Rv0294 and Rv0295c overlap by 12 nucleotides Rv0295c and Rv0296c are separated by 9 nucleotides
Rv0293c: Rv0293c - Conserved protein, at 356,862 to 358,064
Rv0293c
Rv0294: Rv0294 - Probable trans-aconitate methyltransferase Tam, at 358,171 to 358,956
Rv0294
Rv0295c: Rv0295c - Conserved protein, at 358,945 to 359,748
Rv0295c
Rv0296c: Rv0296c - Probable sulfatase, at 359,758 to 361,155
Rv0296c
Position (kb) 358
359
360 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 358.168 kb on + strand at 358.168 kb on + strand at 358.168 kb on + strand at 358.168 kb on + strand at 358.168 kb on + strand at 358.169 kb on - strand at 358.169 kb on - strand at 358.169 kb on - strand at 358.169 kb on - strand at 358.307 kb on - strand, within Rv0294 at 358.619 kb on + strand, within Rv0294 at 358.726 kb on + strand, within Rv0294 at 358.727 kb on - strand, within Rv0294 at 358.884 kb on + strand at 358.885 kb on - strand at 358.955 kb on - strand at 359.108 kb on - strand, within Rv0295c at 359.533 kb on - strand, within Rv0295c at 359.533 kb on - strand, within Rv0295c at 359.623 kb on - strand, within Rv0295c at 359.631 kb on - strand, within Rv0295c at 359.726 kb on + strand at 359.726 kb on + strand at 359.726 kb on + strand at 359.759 kb on + strand at 359.838 kb on - strand at 360.014 kb on - strand, within Rv0296c at 360.014 kb on - strand, within Rv0296c at 360.090 kb on + strand, within Rv0296c at 360.125 kb on + strand, within Rv0296c at 360.138 kb on - strand, within Rv0296c at 360.138 kb on - strand, within Rv0296c at 360.143 kb on + strand, within Rv0296c at 360.144 kb on - strand, within Rv0296c at 360.144 kb on - strand, within Rv0296c at 360.203 kb on + strand, within Rv0296c at 360.203 kb on + strand, within Rv0296c at 360.203 kb on + strand, within Rv0296c at 360.203 kb on + strand, within Rv0296c at 360.203 kb on + strand, within Rv0296c at 360.203 kb on + strand, within Rv0296c at 360.204 kb on - strand, within Rv0296c at 360.205 kb on + strand, within Rv0296c at 360.205 kb on + strand, within Rv0296c at 360.205 kb on + strand, within Rv0296c at 360.205 kb on + strand, within Rv0296c at 360.205 kb on + strand, within Rv0296c at 360.205 kb on + strand, within Rv0296c at 360.205 kb on + strand, within Rv0296c at 360.206 kb on - strand, within Rv0296c at 360.206 kb on - strand, within Rv0296c at 360.206 kb on - strand, within Rv0296c at 360.350 kb on + strand, within Rv0296c at 360.419 kb on + strand, within Rv0296c at 360.419 kb on + strand, within Rv0296c at 360.420 kb on - strand, within Rv0296c at 360.420 kb on - strand, within Rv0296c at 360.420 kb on - strand, within Rv0296c at 360.558 kb on - strand, within Rv0296c at 360.558 kb on - strand, within Rv0296c at 360.602 kb on + strand, within Rv0296c
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic 10 mM (N) remove 358,168 + -0.1 358,168 + +2.2 358,168 + -0.8 358,168 + -0.4 358,168 + -0.0 358,169 - -0.0 358,169 - +2.2 358,169 - -0.7 358,169 - -1.0 358,307 - Rv0294 0.17 +0.8 358,619 + Rv0294 0.57 -0.6 358,726 + Rv0294 0.71 -0.6 358,727 - Rv0294 0.71 -0.1 358,884 + -0.7 358,885 - +0.0 358,955 - +0.1 359,108 - Rv0295c 0.20 +0.4 359,533 - Rv0295c 0.73 +1.2 359,533 - Rv0295c 0.73 +1.1 359,623 - Rv0295c 0.84 +1.3 359,631 - Rv0295c 0.85 +1.8 359,726 + +2.6 359,726 + -0.1 359,726 + +2.6 359,759 + -0.5 359,838 - -0.5 360,014 - Rv0296c 0.18 -0.0 360,014 - Rv0296c 0.18 -0.7 360,090 + Rv0296c 0.24 -0.5 360,125 + Rv0296c 0.26 -0.8 360,138 - Rv0296c 0.27 -0.6 360,138 - Rv0296c 0.27 -0.3 360,143 + Rv0296c 0.28 +0.0 360,144 - Rv0296c 0.28 -1.8 360,144 - Rv0296c 0.28 +3.2 360,203 + Rv0296c 0.32 -0.4 360,203 + Rv0296c 0.32 -0.7 360,203 + Rv0296c 0.32 -0.3 360,203 + Rv0296c 0.32 -0.7 360,203 + Rv0296c 0.32 -0.2 360,203 + Rv0296c 0.32 -0.7 360,204 - Rv0296c 0.32 +0.6 360,205 + Rv0296c 0.32 -1.3 360,205 + Rv0296c 0.32 -0.3 360,205 + Rv0296c 0.32 -0.1 360,205 + Rv0296c 0.32 -2.3 360,205 + Rv0296c 0.32 -0.5 360,205 + Rv0296c 0.32 +0.8 360,205 + Rv0296c 0.32 -0.2 360,206 - Rv0296c 0.32 -0.4 360,206 - Rv0296c 0.32 -0.1 360,206 - Rv0296c 0.32 -0.4 360,350 + Rv0296c 0.42 -0.6 360,419 + Rv0296c 0.47 -0.5 360,419 + Rv0296c 0.47 -0.7 360,420 - Rv0296c 0.47 -0.3 360,420 - Rv0296c 0.47 +0.2 360,420 - Rv0296c 0.47 +0.8 360,558 - Rv0296c 0.57 -0.2 360,558 - Rv0296c 0.57 -0.8 360,602 + Rv0296c 0.60 +1.2
Or see this region's nucleotide sequence