Experiment: L-Glutamic 10 mM (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv0266c and Rv0267 are separated by 176 nucleotides Rv0267 and Rv0268c are separated by 41 nucleotides Rv0268c and Rv0269c are separated by 64 nucleotides
Rv0266c: Rv0266c - Probable 5-oxoprolinase OplA (5-oxo-L-prolinase) (pyroglutamase) (5-OPASE), at 317,525 to 321,154
Rv0266c
Rv0267: Rv0267 - Probable integral membrane nitrite extrusion protein NarU (nitrite facilitator), at 321,331 to 322,722
Rv0267
Rv0268c: Rv0268c - Hypothetical protein, at 322,764 to 323,273
Rv0268c
Rv0269c: Rv0269c - Conserved hypothetical protein, at 323,338 to 324,531
Rv0269c
Position (kb) 321
322
323 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 320.523 kb on + strand, within Rv0266c at 320.524 kb on - strand, within Rv0266c at 320.542 kb on + strand, within Rv0266c at 320.658 kb on + strand, within Rv0266c at 320.658 kb on + strand, within Rv0266c at 320.658 kb on + strand, within Rv0266c at 320.659 kb on - strand, within Rv0266c at 320.659 kb on - strand, within Rv0266c at 320.659 kb on - strand, within Rv0266c at 320.802 kb on + strand at 320.802 kb on + strand at 320.803 kb on - strand at 320.803 kb on - strand at 320.803 kb on - strand at 320.803 kb on - strand at 320.996 kb on + strand at 321.220 kb on + strand at 321.220 kb on + strand at 321.221 kb on - strand at 321.221 kb on - strand at 321.221 kb on - strand at 321.221 kb on - strand at 321.226 kb on + strand at 321.226 kb on + strand at 321.227 kb on - strand at 321.227 kb on - strand at 321.227 kb on - strand at 321.237 kb on + strand at 321.238 kb on - strand at 321.260 kb on - strand at 321.325 kb on + strand at 321.326 kb on - strand at 321.361 kb on + strand at 321.605 kb on + strand, within Rv0267 at 321.606 kb on - strand, within Rv0267 at 321.606 kb on - strand, within Rv0267 at 321.655 kb on + strand, within Rv0267 at 321.656 kb on - strand, within Rv0267 at 322.035 kb on + strand, within Rv0267 at 322.035 kb on + strand, within Rv0267 at 322.035 kb on + strand, within Rv0267 at 322.124 kb on - strand, within Rv0267 at 322.399 kb on + strand, within Rv0267 at 322.586 kb on - strand at 322.614 kb on + strand at 322.615 kb on - strand at 322.676 kb on - strand at 322.681 kb on + strand at 322.690 kb on - strand at 322.720 kb on + strand at 322.721 kb on - strand at 322.721 kb on - strand at 322.725 kb on - strand at 322.878 kb on + strand, within Rv0268c at 322.879 kb on - strand, within Rv0268c at 322.888 kb on + strand, within Rv0268c at 322.977 kb on + strand, within Rv0268c at 322.997 kb on + strand, within Rv0268c at 322.997 kb on + strand, within Rv0268c at 322.997 kb on + strand, within Rv0268c at 322.997 kb on + strand, within Rv0268c at 322.998 kb on - strand, within Rv0268c at 322.998 kb on - strand, within Rv0268c at 323.000 kb on + strand, within Rv0268c at 323.001 kb on - strand, within Rv0268c at 323.001 kb on - strand, within Rv0268c at 323.008 kb on - strand, within Rv0268c at 323.026 kb on - strand, within Rv0268c at 323.026 kb on - strand, within Rv0268c at 323.026 kb on - strand, within Rv0268c at 323.088 kb on + strand, within Rv0268c at 323.089 kb on - strand, within Rv0268c at 323.100 kb on + strand, within Rv0268c at 323.101 kb on - strand, within Rv0268c at 323.101 kb on - strand, within Rv0268c at 323.101 kb on - strand, within Rv0268c at 323.121 kb on + strand, within Rv0268c at 323.121 kb on + strand, within Rv0268c at 323.239 kb on - strand at 323.239 kb on - strand at 323.281 kb on - strand at 323.290 kb on + strand at 323.290 kb on + strand at 323.291 kb on - strand at 323.307 kb on + strand at 323.307 kb on + strand at 323.308 kb on - strand at 323.308 kb on - strand at 323.308 kb on - strand at 323.308 kb on - strand at 323.308 kb on - strand at 323.310 kb on + strand at 323.310 kb on + strand at 323.310 kb on + strand at 323.310 kb on + strand at 323.310 kb on + strand at 323.310 kb on + strand at 323.311 kb on - strand at 323.311 kb on - strand at 323.311 kb on - strand at 323.311 kb on - strand at 323.312 kb on + strand at 323.313 kb on - strand at 323.313 kb on - strand at 323.313 kb on - strand at 323.357 kb on + strand at 323.358 kb on - strand at 323.523 kb on - strand, within Rv0269c
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic 10 mM (N) remove 320,523 + Rv0266c 0.83 +1.7 320,524 - Rv0266c 0.83 +0.7 320,542 + Rv0266c 0.83 -0.6 320,658 + Rv0266c 0.86 -0.2 320,658 + Rv0266c 0.86 -0.6 320,658 + Rv0266c 0.86 +0.2 320,659 - Rv0266c 0.86 +1.2 320,659 - Rv0266c 0.86 -0.8 320,659 - Rv0266c 0.86 +0.3 320,802 + -0.2 320,802 + -0.5 320,803 - +0.3 320,803 - -0.3 320,803 - +1.0 320,803 - -0.8 320,996 + -0.9 321,220 + +1.5 321,220 + -0.1 321,221 - +0.7 321,221 - -0.3 321,221 - -0.4 321,221 - -0.3 321,226 + -0.7 321,226 + -0.4 321,227 - +0.2 321,227 - -0.6 321,227 - -0.4 321,237 + -1.7 321,238 - +0.1 321,260 - -0.4 321,325 + -0.4 321,326 - -0.2 321,361 + +0.7 321,605 + Rv0267 0.20 -0.9 321,606 - Rv0267 0.20 -0.8 321,606 - Rv0267 0.20 -1.1 321,655 + Rv0267 0.23 -1.0 321,656 - Rv0267 0.23 -0.6 322,035 + Rv0267 0.51 -0.2 322,035 + Rv0267 0.51 -2.8 322,035 + Rv0267 0.51 +0.9 322,124 - Rv0267 0.57 -0.4 322,399 + Rv0267 0.77 -1.0 322,586 - +0.2 322,614 + -0.1 322,615 - -0.6 322,676 - -0.5 322,681 + -0.9 322,690 - +0.3 322,720 + +0.4 322,721 - +1.7 322,721 - -1.8 322,725 - -0.3 322,878 + Rv0268c 0.22 -0.4 322,879 - Rv0268c 0.23 -0.2 322,888 + Rv0268c 0.24 -0.1 322,977 + Rv0268c 0.42 -0.3 322,997 + Rv0268c 0.46 -0.7 322,997 + Rv0268c 0.46 -0.2 322,997 + Rv0268c 0.46 -0.7 322,997 + Rv0268c 0.46 -0.9 322,998 - Rv0268c 0.46 +0.1 322,998 - Rv0268c 0.46 -0.1 323,000 + Rv0268c 0.46 -0.2 323,001 - Rv0268c 0.46 -0.3 323,001 - Rv0268c 0.46 +0.8 323,008 - Rv0268c 0.48 -1.5 323,026 - Rv0268c 0.51 +2.8 323,026 - Rv0268c 0.51 -0.2 323,026 - Rv0268c 0.51 +1.0 323,088 + Rv0268c 0.64 -0.2 323,089 - Rv0268c 0.64 +0.7 323,100 + Rv0268c 0.66 +0.1 323,101 - Rv0268c 0.66 -0.4 323,101 - Rv0268c 0.66 -0.3 323,101 - Rv0268c 0.66 -0.3 323,121 + Rv0268c 0.70 -0.2 323,121 + Rv0268c 0.70 -0.1 323,239 - +2.2 323,239 - +1.4 323,281 - -0.6 323,290 + -0.7 323,290 + +0.0 323,291 - +0.3 323,307 + +0.7 323,307 + -0.2 323,308 - -0.9 323,308 - -0.3 323,308 - +0.4 323,308 - -0.3 323,308 - -0.2 323,310 + -0.1 323,310 + +1.2 323,310 + -1.4 323,310 + -0.3 323,310 + -0.3 323,310 + -0.1 323,311 - +0.2 323,311 - -0.4 323,311 - +0.7 323,311 - -0.6 323,312 + -0.0 323,313 - +0.2 323,313 - +0.1 323,313 - -0.3 323,357 + -0.2 323,358 - -0.5 323,523 - Rv0269c 0.15 -0.2
Or see this region's nucleotide sequence