Experiment: L-Glutamine 10 mM (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv0973c and Rv0974c are separated by 5 nucleotides Rv0974c and Rv0975c are separated by 2 nucleotides
Rv0973c: Rv0973c - Probable acetyl-/propionyl-coenzyme A carboxylase alpha chain (alpha subunit) AccA2: biotin carboxylase + biotin carboxyl carrier protein (BCCP), at 1,083,747 to 1,085,750
Rv0973c
Rv0974c: Rv0974c - Probable acetyl-/propionyl-CoA carboxylase (beta subunit) AccD2, at 1,085,756 to 1,087,345
Rv0974c
Rv0975c: Rv0975c - Probable acyl-CoA dehydrogenase FadE13, at 1,087,348 to 1,088,496
Rv0975c
Position (kb)
1085
1086
1087
1088 Strain fitness (log2 ratio)
-1
0
1
2 at 1084.912 kb on + strand, within Rv0973c at 1086.102 kb on + strand, within Rv0974c at 1086.214 kb on - strand, within Rv0974c at 1087.466 kb on + strand, within Rv0975c at 1087.467 kb on - strand, within Rv0975c at 1087.604 kb on + strand, within Rv0975c at 1088.027 kb on + strand, within Rv0975c at 1088.027 kb on + strand, within Rv0975c at 1088.028 kb on - strand, within Rv0975c at 1088.083 kb on + strand, within Rv0975c at 1088.084 kb on - strand, within Rv0975c at 1088.240 kb on + strand, within Rv0975c at 1088.241 kb on - strand, within Rv0975c at 1088.241 kb on - strand, within Rv0975c
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine 10 mM (N) remove 1,084,912 + Rv0973c 0.58 +1.2 1,086,102 + Rv0974c 0.22 -0.3 1,086,214 - Rv0974c 0.29 +1.5 1,087,466 + Rv0975c 0.10 +2.2 1,087,467 - Rv0975c 0.10 +0.1 1,087,604 + Rv0975c 0.22 -0.5 1,088,027 + Rv0975c 0.59 +0.2 1,088,027 + Rv0975c 0.59 +1.6 1,088,028 - Rv0975c 0.59 -0.4 1,088,083 + Rv0975c 0.64 -0.5 1,088,084 - Rv0975c 0.64 -1.2 1,088,240 + Rv0975c 0.78 -0.7 1,088,241 - Rv0975c 0.78 -0.4 1,088,241 - Rv0975c 0.78 -0.8
Or see this region's nucleotide sequence