Experiment: L-Aspartic Acid 10 mM (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv0676c and Rv0677c overlap by 4 nucleotides Rv0677c and Rv0678 are separated by 84 nucleotides Rv0678 and Rv0679c are separated by 55 nucleotides
Rv0676c: Rv0676c - Probable conserved transmembrane transport protein MmpL5, at 775,586 to 778,480
Rv0676c
Rv0677c: Rv0677c - Possible conserved membrane protein MmpS5, at 778,477 to 778,905
Rv0677c
Rv0678: Rv0678 - Conserved protein, at 778,990 to 779,487
Rv0678
Rv0679c: Rv0679c - Conserved threonine rich protein, at 779,543 to 780,040
Rv0679c
Position (kb) 778
779 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 777.489 kb on + strand, within Rv0676c at 777.585 kb on + strand, within Rv0676c at 777.585 kb on + strand, within Rv0676c at 777.651 kb on + strand, within Rv0676c at 777.874 kb on + strand, within Rv0676c at 777.927 kb on + strand, within Rv0676c at 777.927 kb on + strand, within Rv0676c at 777.927 kb on + strand, within Rv0676c at 777.927 kb on + strand, within Rv0676c at 777.928 kb on - strand, within Rv0676c at 777.928 kb on - strand, within Rv0676c at 778.038 kb on + strand, within Rv0676c at 778.304 kb on + strand at 778.393 kb on + strand at 778.393 kb on + strand at 778.394 kb on - strand at 778.394 kb on - strand at 778.694 kb on + strand, within Rv0677c at 778.709 kb on + strand, within Rv0677c at 778.714 kb on - strand, within Rv0677c at 778.977 kb on + strand at 779.263 kb on + strand, within Rv0678 at 779.264 kb on - strand, within Rv0678 at 779.264 kb on - strand, within Rv0678 at 779.264 kb on - strand, within Rv0678 at 779.422 kb on + strand, within Rv0678 at 779.422 kb on + strand, within Rv0678 at 779.423 kb on - strand, within Rv0678 at 779.423 kb on - strand, within Rv0678 at 779.423 kb on - strand, within Rv0678 at 779.423 kb on - strand, within Rv0678 at 779.424 kb on + strand, within Rv0678 at 779.424 kb on + strand, within Rv0678 at 779.424 kb on + strand, within Rv0678 at 779.424 kb on + strand, within Rv0678 at 779.425 kb on - strand, within Rv0678 at 779.459 kb on - strand at 779.797 kb on - strand, within Rv0679c
Per-strain Table
Position Strand Gene LocusTag Fraction L-Aspartic Acid 10 mM (N) remove 777,489 + Rv0676c 0.66 -0.9 777,585 + Rv0676c 0.69 +1.9 777,585 + Rv0676c 0.69 -1.7 777,651 + Rv0676c 0.71 -1.5 777,874 + Rv0676c 0.79 -3.1 777,927 + Rv0676c 0.81 -2.3 777,927 + Rv0676c 0.81 -0.7 777,927 + Rv0676c 0.81 -1.6 777,927 + Rv0676c 0.81 -1.5 777,928 - Rv0676c 0.81 -0.5 777,928 - Rv0676c 0.81 -1.3 778,038 + Rv0676c 0.85 -2.7 778,304 + -2.5 778,393 + -1.5 778,393 + +0.5 778,394 - +0.3 778,394 - -1.6 778,694 + Rv0677c 0.51 -1.7 778,709 + Rv0677c 0.54 -3.1 778,714 - Rv0677c 0.55 -0.4 778,977 + -2.1 779,263 + Rv0678 0.55 -0.2 779,264 - Rv0678 0.55 -0.0 779,264 - Rv0678 0.55 -0.6 779,264 - Rv0678 0.55 -0.1 779,422 + Rv0678 0.87 -0.3 779,422 + Rv0678 0.87 -0.6 779,423 - Rv0678 0.87 +1.0 779,423 - Rv0678 0.87 +0.4 779,423 - Rv0678 0.87 +0.8 779,423 - Rv0678 0.87 +0.1 779,424 + Rv0678 0.87 +0.6 779,424 + Rv0678 0.87 +0.5 779,424 + Rv0678 0.87 +0.4 779,424 + Rv0678 0.87 +0.3 779,425 - Rv0678 0.87 -0.0 779,459 - +0.4 779,797 - Rv0679c 0.51 +1.9
Or see this region's nucleotide sequence