Experiment: Stearic 100 uM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv0923c and Rv0924c are separated by 0 nucleotides Rv0924c and Rv0925c are separated by 31 nucleotides Rv0925c and Rv0926c are separated by 76 nucleotides
Rv0923c: Rv0923c - Conserved hypothetical protein, at 1,029,513 to 1,030,577
Rv0923c
Rv0924c: Rv0924c - Divalent cation-transport integral membrane protein MntH (BRAMP) (MRAMP), at 1,030,578 to 1,031,864
Rv0924c
Rv0925c: Rv0925c - Conserved protein, at 1,031,896 to 1,032,633
Rv0925c
Rv0926c: Rv0926c - Conserved hypothetical protein, at 1,032,710 to 1,033,786
Rv0926c
Position (kb)
1030
1031
1032 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1029.627 kb on + strand, within Rv0923c at 1029.922 kb on + strand, within Rv0923c at 1029.922 kb on + strand, within Rv0923c at 1029.922 kb on + strand, within Rv0923c at 1029.946 kb on + strand, within Rv0923c at 1029.946 kb on + strand, within Rv0923c at 1030.171 kb on + strand, within Rv0923c at 1030.171 kb on + strand, within Rv0923c at 1030.228 kb on - strand, within Rv0923c at 1030.231 kb on + strand, within Rv0923c at 1030.273 kb on + strand, within Rv0923c at 1030.273 kb on + strand, within Rv0923c at 1030.274 kb on - strand, within Rv0923c at 1030.274 kb on - strand, within Rv0923c at 1030.274 kb on - strand, within Rv0923c at 1030.555 kb on + strand at 1030.556 kb on - strand at 1030.556 kb on - strand at 1030.556 kb on - strand at 1030.737 kb on - strand, within Rv0924c at 1030.796 kb on + strand, within Rv0924c at 1030.827 kb on + strand, within Rv0924c at 1030.828 kb on - strand, within Rv0924c at 1030.891 kb on + strand, within Rv0924c at 1030.892 kb on - strand, within Rv0924c at 1031.675 kb on - strand, within Rv0924c at 1031.728 kb on + strand, within Rv0924c at 1031.963 kb on + strand at 1031.963 kb on + strand at 1032.084 kb on - strand, within Rv0925c at 1032.084 kb on - strand, within Rv0925c at 1032.084 kb on - strand, within Rv0925c at 1032.144 kb on - strand, within Rv0925c at 1032.144 kb on - strand, within Rv0925c at 1032.144 kb on - strand, within Rv0925c at 1032.162 kb on + strand, within Rv0925c at 1032.163 kb on - strand, within Rv0925c at 1032.240 kb on - strand, within Rv0925c at 1032.245 kb on + strand, within Rv0925c at 1032.246 kb on - strand, within Rv0925c at 1032.246 kb on - strand, within Rv0925c at 1032.246 kb on - strand, within Rv0925c at 1032.431 kb on - strand, within Rv0925c at 1032.442 kb on + strand, within Rv0925c at 1032.634 kb on - strand at 1032.634 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Stearic 100 uM (C) remove 1,029,627 + Rv0923c 0.11 -0.0 1,029,922 + Rv0923c 0.38 -0.7 1,029,922 + Rv0923c 0.38 -0.2 1,029,922 + Rv0923c 0.38 +0.2 1,029,946 + Rv0923c 0.41 +1.9 1,029,946 + Rv0923c 0.41 +0.2 1,030,171 + Rv0923c 0.62 +0.0 1,030,171 + Rv0923c 0.62 -0.5 1,030,228 - Rv0923c 0.67 -0.7 1,030,231 + Rv0923c 0.67 -0.2 1,030,273 + Rv0923c 0.71 +0.9 1,030,273 + Rv0923c 0.71 +0.3 1,030,274 - Rv0923c 0.71 +0.0 1,030,274 - Rv0923c 0.71 -0.0 1,030,274 - Rv0923c 0.71 -0.3 1,030,555 + -0.3 1,030,556 - +0.5 1,030,556 - +0.1 1,030,556 - -0.6 1,030,737 - Rv0924c 0.12 +0.7 1,030,796 + Rv0924c 0.17 -0.7 1,030,827 + Rv0924c 0.19 -1.1 1,030,828 - Rv0924c 0.19 -2.6 1,030,891 + Rv0924c 0.24 -0.6 1,030,892 - Rv0924c 0.24 -1.0 1,031,675 - Rv0924c 0.85 -0.9 1,031,728 + Rv0924c 0.89 -0.8 1,031,963 + -0.5 1,031,963 + +0.5 1,032,084 - Rv0925c 0.25 -0.8 1,032,084 - Rv0925c 0.25 +0.6 1,032,084 - Rv0925c 0.25 +0.2 1,032,144 - Rv0925c 0.34 -1.3 1,032,144 - Rv0925c 0.34 +0.6 1,032,144 - Rv0925c 0.34 +0.0 1,032,162 + Rv0925c 0.36 -0.4 1,032,163 - Rv0925c 0.36 -1.4 1,032,240 - Rv0925c 0.47 +0.2 1,032,245 + Rv0925c 0.47 -0.4 1,032,246 - Rv0925c 0.47 -0.4 1,032,246 - Rv0925c 0.47 -0.3 1,032,246 - Rv0925c 0.47 -1.0 1,032,431 - Rv0925c 0.72 +0.2 1,032,442 + Rv0925c 0.74 +1.7 1,032,634 - -0.1 1,032,634 - -0.8
Or see this region's nucleotide sequence