Experiment: Stearic 100 uM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv0355c and Rv0356c are separated by 150 nucleotides Rv0356c and Rv0357c overlap by 4 nucleotides Rv0357c and Rv0358 are separated by 90 nucleotides Rv0358 and Rv0359 are separated by 10 nucleotides
Rv0355c: Rv0355c - PPE family protein PPE8, at 424,777 to 434,679
Rv0355c
Rv0356c: Rv0356c - Conserved protein, at 434,830 to 435,474
Rv0356c
Rv0357c: Rv0357c - Probable adenylosuccinate synthetase PurA (imp--aspartate ligase) (ADSS) (ampsase), at 435,471 to 436,769
Rv0357c
Rv0358: Rv0358 - Conserved protein, at 436,860 to 437,507
Rv0358
Rv0359: Rv0359 - Probable conserved integral membrane protein, at 437,518 to 438,297
Rv0359
Position (kb) 435
436
437 Strain fitness (log2 ratio) -1
0
1
2 at 434.633 kb on + strand at 434.633 kb on + strand at 434.633 kb on + strand at 434.633 kb on + strand at 434.681 kb on + strand at 434.681 kb on + strand at 434.681 kb on + strand at 434.682 kb on - strand at 434.772 kb on + strand at 434.772 kb on + strand at 434.773 kb on - strand at 434.831 kb on + strand at 434.848 kb on + strand at 434.957 kb on - strand, within Rv0356c at 435.404 kb on + strand, within Rv0356c at 436.798 kb on - strand at 436.830 kb on - strand at 436.830 kb on - strand at 436.830 kb on - strand at 436.863 kb on + strand at 437.642 kb on - strand, within Rv0359 at 437.759 kb on - strand, within Rv0359
Per-strain Table
Position Strand Gene LocusTag Fraction Stearic 100 uM (C) remove 434,633 + -0.1 434,633 + +0.2 434,633 + +0.2 434,633 + +1.9 434,681 + -0.6 434,681 + -0.2 434,681 + -0.9 434,682 - -0.3 434,772 + -0.4 434,772 + -1.2 434,773 - +0.2 434,831 + +0.1 434,848 + -0.1 434,957 - Rv0356c 0.20 +0.6 435,404 + Rv0356c 0.89 +0.9 436,798 - -0.6 436,830 - -0.3 436,830 - -0.1 436,830 - +1.3 436,863 + +0.3 437,642 - Rv0359 0.16 +0.4 437,759 - Rv0359 0.31 +0.6
Or see this region's nucleotide sequence