Experiment: Stearic 100 uM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv0207c and Rv0208c are separated by 2 nucleotides Rv0208c and Rv0209 are separated by 131 nucleotides Rv0209 and Rv0210 overlap by 4 nucleotides
Rv0207c: Rv0207c - Conserved hypothetical protein, at 247,384 to 248,112
Rv0207c
Rv0208c: Rv0208c - Hypothetical methlytransferase (methylase), at 248,115 to 248,906
Rv0208c
Rv0209: Rv0209 - Hypothetical protein, at 249,038 to 250,123
Rv0209
Rv0210: Rv0210 - Hypothetical protein, at 250,120 to 251,598
Rv0210
Position (kb) 249
250
251 Strain fitness (log2 ratio) -1
0
1 at 248.053 kb on + strand at 248.120 kb on + strand at 248.206 kb on + strand, within Rv0208c at 248.206 kb on + strand, within Rv0208c at 248.311 kb on + strand, within Rv0208c at 248.392 kb on - strand, within Rv0208c at 248.581 kb on + strand, within Rv0208c at 248.734 kb on - strand, within Rv0208c at 248.862 kb on + strand at 248.863 kb on - strand at 249.282 kb on - strand, within Rv0209 at 249.436 kb on + strand, within Rv0209 at 249.437 kb on - strand, within Rv0209 at 249.437 kb on - strand, within Rv0209 at 249.619 kb on - strand, within Rv0209 at 249.924 kb on + strand, within Rv0209 at 249.925 kb on - strand, within Rv0209 at 249.925 kb on - strand, within Rv0209 at 250.004 kb on + strand, within Rv0209 at 250.005 kb on - strand, within Rv0209 at 250.303 kb on - strand, within Rv0210 at 250.303 kb on - strand, within Rv0210 at 250.440 kb on - strand, within Rv0210 at 250.488 kb on + strand, within Rv0210 at 250.488 kb on + strand, within Rv0210 at 250.489 kb on - strand, within Rv0210 at 250.489 kb on - strand, within Rv0210 at 250.846 kb on + strand, within Rv0210
Per-strain Table
Position Strand Gene LocusTag Fraction Stearic 100 uM (C) remove 248,053 + +0.8 248,120 + -0.8 248,206 + Rv0208c 0.11 +0.0 248,206 + Rv0208c 0.11 +0.3 248,311 + Rv0208c 0.25 -0.6 248,392 - Rv0208c 0.35 -0.2 248,581 + Rv0208c 0.59 +0.3 248,734 - Rv0208c 0.78 -0.1 248,862 + +0.3 248,863 - -0.3 249,282 - Rv0209 0.22 -0.5 249,436 + Rv0209 0.37 -0.1 249,437 - Rv0209 0.37 -0.7 249,437 - Rv0209 0.37 -0.4 249,619 - Rv0209 0.53 -0.9 249,924 + Rv0209 0.82 -0.0 249,925 - Rv0209 0.82 -1.3 249,925 - Rv0209 0.82 -1.6 250,004 + Rv0209 0.89 -1.0 250,005 - Rv0209 0.89 -0.8 250,303 - Rv0210 0.12 -0.2 250,303 - Rv0210 0.12 -0.2 250,440 - Rv0210 0.22 -1.2 250,488 + Rv0210 0.25 +0.1 250,488 + Rv0210 0.25 -0.6 250,489 - Rv0210 0.25 +1.0 250,489 - Rv0210 0.25 -0.4 250,846 + Rv0210 0.49 +0.1
Or see this region's nucleotide sequence